RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 CTLA4P16410 223 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 ZNF823P16415 610 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 ZNF23P17027 643 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 ZNF26P17031 533 aaPredicted RBP5.47□□□□□ -1.53
TCF4-249ENST00000625716 HOXB6P17509 224 aaKnown RBP5.47□□□□□ -1.53
TCF4-249ENST00000625716 ATP6V1B2P21281 511 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 TUBG1P23258 451 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 GIFP27352 417 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 LIPAP38571 399 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 CDKN2AP42771 156 aaKnown RBP5.47□□□□□ -1.53
TCF4-249ENST00000625716 GPR6P46095 362 aaPredicted RBP5.47□□□□□ -1.53
TCF4-249ENST00000625716 HTR5AP47898 357 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 CHN2P52757 468 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 HMGA2P52926 109 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 ERVS71-1P61550 626 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 PPP1CBP62140 327 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 LSM6P62312 80 aaKnown RBP5.47□□□□□ -1.53
TCF4-249ENST00000625716 GLO1Q04760 184 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 ENDOGQ14249 297 aaKnown RBP5.47□□□□□ -1.53
TCF4-249ENST00000625716 KRTAP21-3Q3LHN1 58 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 SLC36A3Q495N2 470 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 DNAL1Q4LDG9 190 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 ZMAT1Q5H9K5 638 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 SPATA46Q5T0L3 261 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 FAM166AQ6J272 317 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 LCN8Q6JVE9 175 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 PGBD2Q6P3X8 592 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 FAM122BQ7Z309 247 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.47□□□□□ -1.53
TCF4-249ENST00000625716 NPEPL1Q8NDH3 523 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 GJC3Q8NFK1 279 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 OR2AJ1Q8NGZ0 328 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 OR4K13Q8NH42 304 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 SLC25A40Q8TBP6 338 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 CCDC124Q96CT7 223 aaKnown RBP5.47□□□□□ -1.53
TCF4-249ENST00000625716 ASB9Q96DX5 294 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 POM121L2Q96KW2 1035 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 C4orf45Q96LM5 186 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 COG8Q96MW5 612 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 NMNAT3Q96T66 252 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 GPA33Q99795 319 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 FUZQ9BT04 418 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 BEX2Q9BXY8 128 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 BPESC1Q9GZL8 116 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 EGLN1Q9GZT9 426 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 YY1AP1Q9H869 796 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 RPRD1BQ9NQG5 326 aaKnown RBP5.47□□□□□ -1.53
TCF4-249ENST00000625716 TUBG2Q9NRH3 451 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 CYSLTR2Q9NS75 346 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 TAS2R1Q9NYW7 299 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 ASH2LQ9UBL3 628 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 GRIP1Q9Y3R0 1128 aa5.47□□□□□ -1.53
TCF4-249ENST00000625716 SAMHD1Q9Y3Z3 626 aaKnown RBP5.47□□□□□ -1.53
TCF4-249ENST00000625716 HEATR1Q9H583 2144 aaKnown RBP5.47□□□□□ -1.53
TCF4-249ENST00000625716 CADP27708 2225 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 IGLV3-9A0A075B6K5 115 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 TCRBV5S2A0A599 114 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 LYNX1G3V0Z9 82 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 H3BSA7 217 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 PPIHO43447 177 aaKnown RBP5.46□□□□□ -1.54
TCF4-249ENST00000625716 TIMM8AO60220 97 aaPredicted RBP5.46□□□□□ -1.54
TCF4-249ENST00000625716 MPZL1O95297 269 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 CST1P01037 141 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 TGFAP01135 160 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 GASTP01350 101 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 IGHV3-13P01766 116 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 SCG5P05408 212 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 T-ENOLP0DO92 83 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 IGHV4-31P0DP07 118 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 LYNX1P0DP58 116 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 HIST1H1CP16403 213 aaKnown RBP5.46□□□□□ -1.54
TCF4-249ENST00000625716 HNF1AP20823 631 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 ACHEP22303 614 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 TNFSF4P23510 183 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 COL8A2P25067 703 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 WNT5AP41221 380 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 GSSP48637 474 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 RGS6P49758 472 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 ZNF81P51508 661 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 TMEM33P57088 247 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 FXYD6P3P58550 94 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 CCL8P80075 99 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 MRPS11P82912 194 aaKnown RBP5.46□□□□□ -1.54
TCF4-249ENST00000625716 MS4A2Q01362 244 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.46□□□□□ -1.54
TCF4-249ENST00000625716 TRAP1Q12931 704 aaKnown RBP5.46□□□□□ -1.54
TCF4-249ENST00000625716 GK3PQ14409 553 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 TSTQ16762 297 aaKnown RBP5.46□□□□□ -1.54
TCF4-249ENST00000625716 MICAQ29983 383 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 CHRFAM7AQ494W8 412 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 ANKRD39Q53RE8 183 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 FAM209AQ5JX71 171 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 CLEC12AQ5QGZ9 265 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 SLC35F1Q5T1Q4 408 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 C6orf52Q5T4I8 152 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 MBNL2Q5VZF2 373 aaKnown RBP5.46□□□□□ -1.54
TCF4-249ENST00000625716 OR2T5Q6IEZ7 315 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 ZNF620Q6ZNG0 422 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 PTCHD4Q6ZW05 846 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 ZNF101Q8IZC7 436 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms