RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 FOXN4Q96NZ1 517 aa10.98□□□□□ -0.65
PNKP-217ENST00000625216 KCNS3Q9BQ31 491 aa10.98□□□□□ -0.65
PNKP-217ENST00000625216 ZNF649Q9BS31 505 aa10.98□□□□□ -0.65
PNKP-217ENST00000625216 JAM3Q9BX67 310 aa10.98□□□□□ -0.65
PNKP-217ENST00000625216 RERGLQ9H628 205 aa10.98□□□□□ -0.65
PNKP-217ENST00000625216 GPR35Q9HC97 309 aa10.98□□□□□ -0.65
PNKP-217ENST00000625216 CLEC2DQ9UHP7 191 aa10.98□□□□□ -0.65
PNKP-217ENST00000625216 MOKQ9UQ07 419 aa10.98□□□□□ -0.65
PNKP-217ENST00000625216 LSM2Q9Y333 95 aaKnown RBP10.98□□□□□ -0.65
PNKP-217ENST00000625216 DPPA5A6NC42 116 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 ZNF726A6NNF4 738 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 C12orf71A8MTZ7 269 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 AHCYL1O43865 530 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 INMTO95050 263 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 IGHV4-39P01824 125 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 CRYAAP02489 173 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 LIMS3P0CW19 117 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 LIMS4P0CW20 117 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 DCKP27707 260 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 GP2P55259 537 aaKnown RBP10.97□□□□□ -0.65
PNKP-217ENST00000625216 DSCR9P59020 149 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 ARF1P84077 181 aaKnown RBP10.97□□□□□ -0.65
PNKP-217ENST00000625216 SPOCK1Q08629 439 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 POU4F2Q12837 409 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 RAB35Q15286 201 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 HIST3H3Q16695 136 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 PHYHD1Q5SRE7 291 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 UBE2UQ5VVX9 321 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 RNLSQ5VYX0 342 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 OTPQ5XKR4 325 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 SLC25A47Q6Q0C1 308 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 DNM1P46Q6ZS02 220 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 TIGD4Q8IY51 512 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 C20orf196Q8IYI0 205 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 RFLNBQ8N5W9 214 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 IL17RDQ8NFM7 739 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 TMEM54Q969K7 222 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 OR5M11Q96RB7 305 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 CNN2Q99439 309 aaKnown RBP10.97□□□□□ -0.65
PNKP-217ENST00000625216 TBX5Q99593 518 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 CACNG6Q9BXT2 260 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 MARCH7Q9H992 704 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 CRLF2Q9HC73 371 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 B3GAT2Q9NPZ5 323 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 COPS3Q9UNS2 423 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 COA3Q9Y2R0 106 aaPredicted RBP10.97□□□□□ -0.65
PNKP-217ENST00000625216 EXOSC1Q9Y3B2 195 aaKnown RBP10.97□□□□□ -0.65
PNKP-217ENST00000625216 PMF1-BGLAPU3KQ54 211 aa10.97□□□□□ -0.65
PNKP-217ENST00000625216 IGHV1-18A0A0C4DH31 117 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 A6NHS1 94 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 VSTM5A8MXK1 200 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 ZNF99A8MXY4 864 aaPredicted RBP10.96□□□□□ -0.65
PNKP-217ENST00000625216 CENPBD1B2RD01 187 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 H7C417 338 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 KHDRBS3O75525 346 aaKnown RBP10.96□□□□□ -0.65
PNKP-217ENST00000625216 IGKV3-15P01624 115 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 IGLV1-44P01699 117 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 GAAP10253 952 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 CBR1P16152 277 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 CRABP1P29762 137 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 ATP6V1E1P36543 226 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 ARR3P36575 388 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 CSNK1A1P48729 337 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 ZNF133P52736 654 aaPredicted RBP10.96□□□□□ -0.65
PNKP-217ENST00000625216 ZNF85Q03923 595 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 RAB39AQ14964 217 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 CEACAM16Q2WEN9 425 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 OR2G6Q5TZ20 316 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 DNM1P34Q6PK57 102 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 Q71RC1 249 aaPredicted RBP10.96□□□□□ -0.65
PNKP-217ENST00000625216 SSX6Q7RTT6 188 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 SLC35F2Q8IXU6 374 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 NANOGP1Q8N7R0 232 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 OR10H4Q8NGA5 316 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 NSMAFQ92636 917 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 REG4Q9BYZ8 158 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 NELFAQ9H3P2 528 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 VCX3AQ9NNX9 186 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 MRPL22Q9NWU5 206 aaKnown RBP10.96□□□□□ -0.65
PNKP-217ENST00000625216 ERVK13-1Q9NX77 482 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 GLTPQ9NZD2 209 aa10.96□□□□□ -0.65
PNKP-217ENST00000625216 FBXO9Q9UK97 447 aaPredicted RBP10.96□□□□□ -0.65
PNKP-217ENST00000625216 CSPG4Q6UVK1 2322 aa10.96□□□□□ -0.66
PNKP-217ENST00000625216 A0A096LPE4 126 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 A0A1W2PPZ6 126 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 PRR32B1ATL7 298 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 ATP6V1G2-DDX39BF2Z307 99 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 MYL12BO14950 172 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 NDUFS7O75251 213 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 MYL12AP19105 171 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 HCCSP53701 268 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 NAAAQ02083 359 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 MEP1BQ16820 701 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 FOXB2Q5VYV0 432 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 LRFN4Q6PJG9 635 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 ZNF627Q7L945 461 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 ZNF367Q7RTV3 350 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 SLC16A9Q7RTY1 509 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 LHFPL3Q86UP9 236 aa10.95□□□□□ -0.66
PNKP-217ENST00000625216 ERI1Q8IV48 349 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms