RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 SLC10A1Q14973 349 aa11.23□□□□□ -0.61
LITAF-221ENST00000622633 PNLIPRP3Q17RR3 467 aa11.23□□□□□ -0.61
LITAF-221ENST00000622633 ELFN2Q5R3F8 820 aa11.23□□□□□ -0.61
LITAF-221ENST00000622633 PEG10Q86TG7 708 aaKnown RBP11.23□□□□□ -0.61
LITAF-221ENST00000622633 SLC35F3Q8IY50 421 aa11.23□□□□□ -0.61
LITAF-221ENST00000622633 CA13Q8N1Q1 262 aa11.23□□□□□ -0.61
LITAF-221ENST00000622633 HIST3H2BBQ8N257 126 aa11.23□□□□□ -0.61
LITAF-221ENST00000622633 ZNRF4Q8WWF5 429 aa11.23□□□□□ -0.61
LITAF-221ENST00000622633 CTHRC1Q96CG8 243 aa11.23□□□□□ -0.61
LITAF-221ENST00000622633 CACFD1Q9UGQ2 172 aa11.23□□□□□ -0.61
LITAF-221ENST00000622633 RPH3ALQ9UNE2 315 aa11.23□□□□□ -0.61
LITAF-221ENST00000622633 RCE1Q9Y256 329 aa11.23□□□□□ -0.61
LITAF-221ENST00000622633 TIMM10BQ9Y5J6 103 aa11.23□□□□□ -0.61
LITAF-221ENST00000622633 TRANK1O15050 2925 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 TRAV1-2A0A0B4J238 106 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 M0QZK8 103 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 GOSR2O14653 212 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 OGG1O15527 345 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 HCRTR1O43613 425 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 NKX2-2O95096 273 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 CTSBP07858 339 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 HOXB2P14652 356 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 GSK3AP49840 483 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 GXYLT1Q4G148 440 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 ZNF761Q86XN6 746 aaPredicted RBP11.22□□□□□ -0.61
LITAF-221ENST00000622633 BPIFB2Q8N4F0 458 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 CSNK1A1LQ8N752 337 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 PNLDC1Q8NA58 520 aaKnown RBP11.22□□□□□ -0.61
LITAF-221ENST00000622633 IP6K3Q96PC2 410 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 OR14A2Q96R54 314 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 PDCD1LG2Q9BQ51 273 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 DNAJB12Q9NXW2 375 aaKnown RBP11.22□□□□□ -0.61
LITAF-221ENST00000622633 ADAM18Q9Y3Q7 739 aa11.22□□□□□ -0.61
LITAF-221ENST00000622633 ANKRD61A6NGH8 418 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 FLRT2O43155 660 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 TCF21O43680 179 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 CTNSO60931 367 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 ITGA10O75578 1167 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 KLF8O95600 359 aaPredicted RBP11.21□□□□□ -0.61
LITAF-221ENST00000622633 DAOP14920 347 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 MECP2P51608 486 aaKnown RBP11.21□□□□□ -0.61
LITAF-221ENST00000622633 UBE2MP61081 183 aaKnown RBP11.21□□□□□ -0.61
LITAF-221ENST00000622633 PPP1CAP62136 330 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 RPS11P62280 158 aaKnown RBP eCLIP11.21□□□□□ -0.61
LITAF-221ENST00000622633 SIRPAP78324 504 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 PSG6Q00889 435 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 IL10RAQ13651 578 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 CDK5R1Q15078 307 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 PPP1R3BQ86XI6 285 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 OR2AK2Q8NG84 335 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 BAHD1Q8TBE0 780 aaPredicted RBP11.21□□□□□ -0.61
LITAF-221ENST00000622633 CCDC107Q8WV48 283 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 CCDC74BQ96LY2 380 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 UTP23Q9BRU9 249 aaKnown RBP11.21□□□□□ -0.61
LITAF-221ENST00000622633 ZNF426Q9BUY5 554 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 TRIM2Q9C040 744 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 TMEM100Q9NV29 134 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 SERTAD3Q9UJW9 196 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 GNG8Q9UK08 70 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 RANBP2P49792 3224 aaKnown RBP11.21□□□□□ -0.61
LITAF-221ENST00000622633 TRBV2A0A0J9YWF9 115 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 HRKO00198 91 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 GSTZ1O43708 216 aaPredicted RBP11.21□□□□□ -0.61
LITAF-221ENST00000622633 VSIG10L2P0DP72 767 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 EDNRAP25101 427 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 APLNRP35414 380 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 FAM53BQ14153 422 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 MST1LQ2TV78 715 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 LINC00303Q3SY05 128 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 PDZD11Q5EBL8 140 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 OR2A2Q6IF42 318 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 KIRREL2Q6UWL6 708 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 SLC35F2Q8IXU6 374 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 GTPBP8Q8N3Z3 284 aaPredicted RBP11.21□□□□□ -0.61
LITAF-221ENST00000622633 ZNF671Q8TAW3 534 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 SMIM19Q96E16 107 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 CNN2Q99439 309 aaKnown RBP11.21□□□□□ -0.61
LITAF-221ENST00000622633 SEPSECSQ9HD40 501 aaKnown RBP11.21□□□□□ -0.61
LITAF-221ENST00000622633 HRASLS2Q9NWW9 162 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 WSB2Q9NYS7 404 aaPredicted RBP11.21□□□□□ -0.61
LITAF-221ENST00000622633 ABRACLQ9P1F3 81 aa11.21□□□□□ -0.61
LITAF-221ENST00000622633 C7orf77A4D0Y5 90 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 OR5H15A6NDH6 313 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 OR5H1A6NKK0 313 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 TXNDC12O95881 172 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 OR2T7P0C7T2 308 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 RPL4P36578 427 aaKnown RBP11.2□□□□□ -0.62
LITAF-221ENST00000622633 SUCLG1P53597 346 aaKnown RBP11.2□□□□□ -0.62
LITAF-221ENST00000622633 PITPNAQ00169 270 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 BEX5Q5H9J7 111 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 IL34Q6ZMJ4 242 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 FRMD1Q8N878 549 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 OR9A4Q8NGU2 314 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 OR2T27Q8NH04 317 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 NMNAT3Q96T66 252 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 GABRG3Q99928 467 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 LANCL2Q9NS86 450 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 PRODH2Q9UF12 536 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 ICAM5Q9UMF0 924 aa11.2□□□□□ -0.62
LITAF-221ENST00000622633 ZNF724A8MTY0 619 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms