RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 DNAJC3Q13217 504 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 RCAN2Q14206 197 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 WDR43Q15061 677 aaKnown RBP eCLIP3.12□□□□□ -1.91
CPNE3-213ENST00000622183 RPEL1Q2QD12 228 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 Q6P435 159 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 C12orf54Q6X4T0 127 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 FAM71AQ8IYT1 594 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 CMTM8Q8IZV2 173 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 CBR4Q8N4T8 237 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 OR6Q1Q8NGQ2 317 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 NRBF2Q96F24 287 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 CSPG4P5Q96PW8 444 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 UBE2ZQ9H832 354 aaPredicted RBP3.12□□□□□ -1.91
CPNE3-213ENST00000622183 ZC4H2Q9NQZ6 224 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 YARS2Q9Y2Z4 477 aaKnown RBP3.12□□□□□ -1.91
CPNE3-213ENST00000622183 ASTN1O14525 1302 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 ZNF99A8MXY4 864 aaPredicted RBP3.11□□□□□ -1.91
CPNE3-213ENST00000622183 XRCC2O43543 280 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 SCELO95171 688 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 SLC25A14O95258 325 aaPredicted RBP3.11□□□□□ -1.91
CPNE3-213ENST00000622183 KRT16P08779 473 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 CD3GP09693 182 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 SRMP19623 302 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 RAB3AP20336 220 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 HCAR3P49019 387 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 ZNF121P58317 390 aaPredicted RBP3.11□□□□□ -1.91
CPNE3-213ENST00000622183 ZNF33AQ06730 810 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 ART3Q13508 389 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 IRF4Q15306 451 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 CAVIN4Q5BKX8 364 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 H3F3CQ6NXT2 135 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 PRSS58Q8IYP2 241 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 ENTHD1Q8IYW4 607 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 OTUD6BQ8N6M0 293 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 METTL13Q8N6R0 699 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 C11orf72Q8NBR9 251 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 OR51F2Q8NH61 342 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 CA5BP1Q8WTZ4 195 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 NAT6Q93015 286 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 FAM104AQ969W3 186 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 RPEQ96AT9 228 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 TM4SF18Q96CE8 201 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 CERS2Q96G23 380 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 CALN1Q9BXU9 219 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 PLA2G2FQ9BZM2 168 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 SPNS1Q9H2V7 528 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 SYNDIG1Q9H7V2 258 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 MYOZ2Q9NPC6 264 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 CTSFQ9UBX1 484 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 GAKO14976 1311 aa3.11□□□□□ -1.91
CPNE3-213ENST00000622183 GABRR3A8MPY1 467 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 H7C417 338 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 NME4O00746 187 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 SNAI2O43623 268 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 CDC40O60508 579 aaKnown RBP eCLIP3.1□□□□□ -1.91
CPNE3-213ENST00000622183 SPAG7O75391 227 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 OXTP01178 125 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 TACSTD2P09758 323 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 IGHV1-8P0DP01 117 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 ZNF823P16415 610 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 TCN2P20062 427 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 USF1P22415 310 aaPredicted RBP3.1□□□□□ -1.91
CPNE3-213ENST00000622183 LONP1P36776 959 aaKnown RBP3.1□□□□□ -1.91
CPNE3-213ENST00000622183 GPR1P46091 355 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 P2RX1P51575 399 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 GABRA6Q16445 453 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 UBE2SQ16763 222 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 DEFB116Q30KQ4 102 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 NKAIN1Q4KMZ8 207 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 ADNP2Q6IQ32 1131 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 VTCN1Q7Z7D3 282 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 LINC00523Q86TU6 105 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 HORMAD1Q86X24 394 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 ZNF547Q8IVP9 402 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 MYOCDQ8IZQ8 938 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 VKORC1L1Q8N0U8 176 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 OR52K1Q8NGK4 314 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 LRRC29Q8WV35 223 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 APH1AQ96BI3 265 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 DEFB129Q9H1M3 183 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 CHMP4BQ9H444 224 aaKnown RBP3.1□□□□□ -1.91
CPNE3-213ENST00000622183 EDA2RQ9HAV5 297 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 SLC39A1Q9NY26 324 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 ZNF282Q9UDV7 671 aaPredicted RBP3.1□□□□□ -1.91
CPNE3-213ENST00000622183 MTFP1Q9UDX5 166 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 RAB26Q9ULW5 256 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 CDC42BPBQ9Y5S2 1711 aa3.1□□□□□ -1.91
CPNE3-213ENST00000622183 PRRC2AP48634 2157 aaKnown RBP3.1□□□□□ -1.91
CPNE3-213ENST00000622183 COL16A1Q07092 1604 aaPredicted RBP3.09□□□□□ -1.91
CPNE3-213ENST00000622183 IGLV1-50A0A075B6I6 118 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 IGHV5-10-1A0A0J9YXX1 117 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 OR6C74A6NCV1 312 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 SERPINE3A8MV23 424 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 GABRPO00591 440 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 PLPP1O14494 284 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 ERI3O43414 337 aaKnown RBP3.09□□□□□ -1.91
CPNE3-213ENST00000622183 FARS2O95363 451 aaKnown RBP3.09□□□□□ -1.91
CPNE3-213ENST00000622183 CTSLP07711 333 aa3.09□□□□□ -1.91
CPNE3-213ENST00000622183 HOXC4P09017 264 aaPredicted RBP3.09□□□□□ -1.91
CPNE3-213ENST00000622183 IL32P24001 234 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms