RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 MEGF6O75095 1541 aa2.83□□□□□ -1.96
BRCA1-229ENST00000621897 IGLV8-61A0A075B6I0 122 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 PP2D1A8MPX8 630 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 G3V4G9 280 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 M0R036 132 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 DYNC1I1O14576 645 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 ACOX3O15254 700 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 UGT2B17O75795 530 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 ATP5LO75964 103 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 RCBTB2O95199 551 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 LYPLA2O95372 231 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 CA1P00915 261 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-229ENST00000621897 TIMP1P01033 207 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 HBQ1P09105 142 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 TACSTD2P09758 323 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 CT45A10P0DMU9 189 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 COX5BP10606 129 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 BCKDHAP12694 445 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 HLA-GP17693 338 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 XRCC1P18887 633 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-229ENST00000621897 IGFBP5P24593 272 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 GCAP28676 217 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 FOXN2P32314 431 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 SAA4P35542 130 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 MAP3K8P41279 467 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 MAGEA3P43357 314 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 BDKRB1P46663 353 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 GNPDA1P46926 289 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 TMED10P49755 219 aaKnown RBP2.82□□□□□ -1.96
BRCA1-229ENST00000621897 KPNA2P52292 529 aaKnown RBP2.82□□□□□ -1.96
BRCA1-229ENST00000621897 RIPPLY3P57055 190 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 RPS15AP62244 130 aaKnown RBP2.82□□□□□ -1.96
BRCA1-229ENST00000621897 MRPS22P82650 360 aaKnown RBP2.82□□□□□ -1.96
BRCA1-229ENST00000621897 C2orf54Q08AI8 447 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 RIPPLY1Q0D2K3 151 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 C2orf80Q0P641 193 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 TPBGQ13641 420 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 VGLL4Q14135 290 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 ZNHIT3Q15649 155 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-229ENST00000621897 CD226Q15762 336 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 PGGHGQ32M88 737 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 CYBRD1Q53TN4 286 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 DMRTC1Q5HYR2 192 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 TIMM23BQ5SRD1 257 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 SYPL2Q5VXT5 272 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 SPOPLQ6IQ16 392 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 FAHD1Q6P587 224 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 BTNL3Q6UXE8 466 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 PGAP1Q75T13 922 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 SSX6Q7RTT6 188 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 TGIF2LYQ8IUE0 185 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 HS3ST5Q8IZT8 346 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 PGAM4Q8N0Y7 254 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 Q8N402 240 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 STPG2Q8N412 459 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 C15orf54Q8N8G6 183 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 CATSPER1Q8NEC5 780 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 AENQ8WTP8 325 aaKnown RBP2.82□□□□□ -1.96
BRCA1-229ENST00000621897 SETD7Q8WTS6 366 aaKnown RBP2.82□□□□□ -1.96
BRCA1-229ENST00000621897 C22orf15Q8WYQ4 148 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 HGDQ93099 445 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 APH1AQ96BI3 265 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 CXorf40BQ96DE9 158 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 CCDC126Q96EE4 140 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 C16orf74Q96GX8 76 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 CENPNQ96H22 339 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-229ENST00000621897 ITCHQ96J02 903 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 IMMP1LQ96LU5 166 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 C9orf85Q96MD7 179 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 MBOAT7Q96N66 472 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 ZNF641Q96N77 438 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-229ENST00000621897 PRAP1Q96NZ9 151 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 CLCC1Q96S66 551 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 CPXM1Q96SM3 734 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 ATP5SQ99766 215 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 LHX5Q9H2C1 402 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 ZNF702PQ9H963 129 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 PLEKHA1Q9HB21 404 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 ESM1Q9NQ30 184 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 EXD2Q9NVH0 621 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 DUS2Q9NX74 493 aaKnown RBP2.82□□□□□ -1.96
BRCA1-229ENST00000621897 BABAM2Q9NXR7 383 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 BFARQ9NZS9 450 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 UVRAGQ9P2Y5 699 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 GALPQ9UBC7 116 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 FBXL3Q9UKT7 428 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 SCML2Q9UQR0 700 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 PDE10AQ9Y233 779 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 YARS2Q9Y2Z4 477 aaKnown RBP2.82□□□□□ -1.96
BRCA1-229ENST00000621897 TNRQ92752 1358 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 FRMPD3Q5JV73 1810 aa2.82□□□□□ -1.96
BRCA1-229ENST00000621897 LRIT2A6NDA9 550 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 SLC17A2O00624 439 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 PLPP3O14495 311 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 TM9SF1O15321 606 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 SLC31A1O15431 190 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 TNFAIP8O95379 198 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 ORM1P02763 201 aa2.81□□□□□ -1.96
BRCA1-229ENST00000621897 RPS17P08708 135 aaKnown RBP2.81□□□□□ -1.96
BRCA1-229ENST00000621897 NQO1P15559 274 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms