RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 FAM27BQ5VT28 67 aa16.32■□□□□ 0.2
SEMA6C-210ENST00000621728 STEAP3Q658P3 488 aa16.32■□□□□ 0.2
SEMA6C-210ENST00000621728 CD200R1LQ6Q8B3 271 aa16.32■□□□□ 0.2
SEMA6C-210ENST00000621728 SLC22A24Q8N4F4 322 aa16.32■□□□□ 0.2
SEMA6C-210ENST00000621728 NAXEQ8NCW5 288 aa16.32■□□□□ 0.2
SEMA6C-210ENST00000621728 MBD3L2Q8NHZ7 208 aaPredicted RBP16.32■□□□□ 0.2
SEMA6C-210ENST00000621728 KCTD7Q96MP8 289 aa16.32■□□□□ 0.2
SEMA6C-210ENST00000621728 HDHD5Q9BXW7 423 aa16.32■□□□□ 0.2
SEMA6C-210ENST00000621728 PNRC2Q9NPJ4 139 aaKnown RBP16.32■□□□□ 0.2
SEMA6C-210ENST00000621728 GLRX2Q9NS18 164 aa16.32■□□□□ 0.2
SEMA6C-210ENST00000621728 TXNL4BQ9NX01 149 aaKnown RBP16.32■□□□□ 0.2
SEMA6C-210ENST00000621728 SH3BGRL2Q9UJC5 107 aa16.32■□□□□ 0.2
SEMA6C-210ENST00000621728 TINAGQ9UJW2 476 aa16.32■□□□□ 0.2
SEMA6C-210ENST00000621728 RP1L1Q8IWN7 2480 aaPredicted RBP16.32■□□□□ 0.2
SEMA6C-210ENST00000621728 TRBV2A0A0J9YWF9 115 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 FIGNL2A6NMB9 653 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 PLPP2O43688 288 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 DOK2O60496 412 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 WDR1O75083 606 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 APOA1P02647 267 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 CD8BP10966 210 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 GABRA1P14867 456 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 CAPZA2P47755 286 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 GDI2P50395 445 aaKnown RBP16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 GPR50Q13585 617 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 TFAP2EQ6VUC0 442 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 KCTD20Q7Z5Y7 419 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 DOLPP1Q86YN1 238 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 SKA3Q8IX90 412 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 PRSS35Q8N3Z0 413 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 POC5Q8NA72 575 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 AP3S1Q92572 193 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 GHSRQ92847 366 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 FRRS1LQ9P0K9 344 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 EMC9Q9Y3B6 208 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 SPTA1P02549 2419 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 INTS1Q8N201 2190 aaKnown RBP16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 RPL36A-HNRNPH2H7BZ11 118 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 H2BFMP0C1H6 154 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 NPR2P20594 1047 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 RIDAP52758 137 aaKnown RBP16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 PER3P56645 1201 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 TAS2R43P59537 309 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 ODF4Q2M2E3 257 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 FBXW9Q5XUX1 488 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 RPL22L1Q6P5R6 122 aaKnown RBP16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 NCCRP1Q6ZVX7 275 aaPredicted RBP16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 SMIM19Q96E16 107 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 GTF2A1LQ9UNN4 478 aa16.31■□□□□ 0.2
SEMA6C-210ENST00000621728 TRDV1A0A1B0GX56 115 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 OR6C65A6NJZ3 312 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 H3BSH0 61 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 TNFSF13O75888 250 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 ITGA5P08648 1049 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 ANOS1P23352 680 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 TNFSF8P32971 234 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 KIR3DL2P43630 455 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 CCDC92Q53HC0 331 aaPredicted RBP16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 C22orf42Q6IC83 251 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 OR2G2Q8NGZ5 317 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 CHAC2Q8WUX2 184 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 BRD7Q9NPI1 651 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 MALT1Q9UDY8 824 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 SLC22A13Q9Y226 551 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 SLC5A6Q9Y289 635 aa16.3■□□□□ 0.2
SEMA6C-210ENST00000621728 SLC19A2O60779 497 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 SRSF10O75494 262 aaKnown RBP16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 IL18BPO95998 194 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 MAGEB1P43366 347 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 TGM4P49221 684 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 ALKBH1Q13686 389 aaKnown RBP16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 WDR38Q5JTN6 314 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 OR2A2Q6IF42 318 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 TMEM91Q6ZNR0 172 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 CADM3Q8N126 398 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 RPS4Y2Q8TD47 263 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 SLC7A6Q92536 515 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 RGP1Q92546 391 aaPredicted RBP16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 ZNF224Q9NZL3 707 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 CMAHPQ9Y471 501 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 USP24Q9UPU5 2620 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 ZNF503-AS2A6NEH8 195 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 BOLA2-SMG1P6H3BVE0 249 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 CTDSP2O14595 271 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 ZFPL1O95159 310 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 CST2P09228 141 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 TMIGD3P0DMS9 266 aaPredicted RBP16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 ZNF32P17041 273 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 CFL1P23528 166 aaKnown RBP16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 HIST1H3AP68431 136 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 CCDC58Q4VC31 144 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 HIST2H3PS2Q5TEC6 136 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 HIST2H3AQ71DI3 136 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 SLC16A14Q7RTX9 510 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 SNX29P2Q8IUI4 249 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 RDH10Q8IZV5 341 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 C4orf45Q96LM5 186 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 KCNS3Q9BQ31 491 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 BARHL1Q9BZE3 327 aa16.29■□□□□ 0.2
SEMA6C-210ENST00000621728 SNTG1Q9NSN8 517 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms