RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 DMKNQ6E0U4 476 aaPredicted RBP9.3□□□□□ -0.92
VPS11-208ENST00000621676 KCTD18Q6PI47 426 aaPredicted RBP9.3□□□□□ -0.92
VPS11-208ENST00000621676 CCBE1Q6UXH8 406 aaPredicted RBP9.3□□□□□ -0.92
VPS11-208ENST00000621676 SLC16A14Q7RTX9 510 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 ZNF679Q8IYX0 411 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 OR10S1Q8NGN2 331 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 OR2V1Q8NHB1 315 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 KCNE4Q8WWG9 221 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 FAM210AQ96ND0 272 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 ATF6BQ99941 703 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 PEX16Q9Y5Y5 336 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 TRDV1A0A1B0GX56 115 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 CIB4A0PJX0 185 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 FAM221AA4D161 298 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 SLC34A2O95436 690 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 ZNF32P17041 273 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 MSX1P28360 303 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 DUSP1P28562 367 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 ACTA2P62736 377 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 ACTG2P63267 376 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 DGCR2P98153 550 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 EIF3IQ13347 325 aaKnown RBP9.3□□□□□ -0.92
VPS11-208ENST00000621676 ANKRD16Q6P6B7 361 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 CDC20BQ86Y33 519 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 PHF21AQ96BD5 680 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 FAM173AQ9BQD7 235 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 C1orf198Q9H425 327 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 B4GALT7Q9UBV7 327 aa9.3□□□□□ -0.92
VPS11-208ENST00000621676 USP9YO00507 2555 aaPredicted RBP9.29□□□□□ -0.92
VPS11-208ENST00000621676 ZNF462Q96JM2 2506 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 DCHS2Q6V1P9 2916 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 IRGMA1A4Y4 181 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 DHHO43323 396 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 DKK1O94907 266 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 PGA4P0DJD7 388 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 PGA3P0DJD8 388 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 EPXP11678 715 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 BLVRAP53004 296 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 PSPHP78330 225 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 HLXQ14774 488 aaPredicted RBP9.29□□□□□ -0.92
VPS11-208ENST00000621676 BCL2L15Q5TBC7 163 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 RPL22L1Q6P5R6 122 aaKnown RBP9.29□□□□□ -0.92
VPS11-208ENST00000621676 STAC2Q6ZMT1 411 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 ZIC4Q8N9L1 334 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 NOXO1Q8NFA2 376 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 FBXO17Q96EF6 278 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 OR8B4Q96RC9 309 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 CRNNQ9UBG3 495 aaPredicted RBP9.29□□□□□ -0.92
VPS11-208ENST00000621676 RAXQ9Y2V3 346 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 TRGV5A0A0B4J1U4 118 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 C21orf140B9A014 251 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 KLRC4-KLRK1H3BQV0 150 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 PYCARD-AS1I3L0S3 204 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 INHBBP09529 407 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 IL7P13232 177 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 CX3CR1P49238 355 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 CCR6P51684 374 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 PPP5CP53041 499 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 CSNK2A1P68400 391 aaPredicted RBP9.29□□□□□ -0.92
VPS11-208ENST00000621676 CDONQ4KMG0 1287 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 GGNQ86UU5 652 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 LYSMD2Q8IV50 215 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 FAM219AQ8IW50 185 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 FADS6Q8N9I5 356 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 ADAT3Q96EY9 351 aaPredicted RBP9.29□□□□□ -0.92
VPS11-208ENST00000621676 ABHD17AQ96GS6 310 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 NOX1Q9Y5S8 564 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 ABCA12Q86UK0 2595 aa9.29□□□□□ -0.92
VPS11-208ENST00000621676 TRAV18A0A075B6X5 111 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 AQP7P3A6NL99 342 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 OR4C45A6NMZ5 311 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 ZNF701M0R085 212 aaPredicted RBP9.28□□□□□ -0.92
VPS11-208ENST00000621676 PLPP2O43688 288 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 FZD7O75084 574 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 SYNGR4O95473 234 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 MT-ND4P03905 459 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 SRD5A2P31213 254 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 ARF1P84077 181 aaKnown RBP9.28□□□□□ -0.92
VPS11-208ENST00000621676 NKPD1Q17RQ9 610 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 TMEM44Q2T9K0 475 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 SNAI3Q3KNW1 292 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 ANGPTL5Q86XS5 388 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 OR52N4Q8NGI2 321 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 SYNPRQ8TBG9 265 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 GPR148Q8TDV2 347 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 IRF2BPLQ9H1B7 796 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 ATG5Q9H1Y0 275 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 ZNF703Q9H7S9 590 aaPredicted RBP9.28□□□□□ -0.92
VPS11-208ENST00000621676 FLVCR1Q9Y5Y0 555 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 C5orf49A4QMS7 147 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 ENDOUP21128 410 aaKnown RBP9.28□□□□□ -0.92
VPS11-208ENST00000621676 NHLH1Q02575 133 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 SLC25A30Q5SVS4 291 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 ZNF704Q6ZNC4 412 aaPredicted RBP9.28□□□□□ -0.92
VPS11-208ENST00000621676 EXD3Q8N9H8 876 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 OR2M2Q96R28 347 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 NEK6Q9HC98 313 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 SPRR3Q9UBC9 169 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 PCDHGA1Q9Y5H4 931 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 NUP210LQ5VU65 1888 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms