RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 MOKQ9UQ07 419 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 HMGN4O00479 90 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 ACTL6BO94805 426 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 IL1RNP18510 177 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 RAB1AP62820 205 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 UMODL1-AS1Q8N2C9 162 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 LMX1AQ8TE12 382 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 MS4A4EQ96PG1 132 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 AHCTF1Q8WYP5 2266 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 GLSO94925 669 aaPredicted RBP4.59□□□□□ -1.68
VPS13D-214ENST00000620676 ETHE1O95571 254 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 SPINK2P20155 84 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 SPCS3P61009 180 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 ELOCQ15369 112 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 WDR25Q64LD2 544 aaPredicted RBP4.59□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM225Q6GV28 225 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 OR5H15A6NDH6 313 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 IGLON5A6NGN9 336 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 OR5H1A6NKK0 313 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 KIAA1324LA8MWY0 1029 aaPredicted RBP4.59□□□□□ -1.68
VPS13D-214ENST00000620676 H3BP45 60 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 CRABP1P29762 137 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 KLF9Q13886 244 aaPredicted RBP4.59□□□□□ -1.68
VPS13D-214ENST00000620676 VWA1Q6PCB0 445 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM108Q6UXF1 575 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 STAC2Q6ZMT1 411 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 MRPL10Q7Z7H8 261 aaKnown RBP4.59□□□□□ -1.68
VPS13D-214ENST00000620676 KLHDC8AQ8IYD2 350 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 SERINC2Q96SA4 455 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 URM1Q9BTM9 101 aaKnown RBP4.59□□□□□ -1.68
VPS13D-214ENST00000620676 BET1LQ9NYM9 111 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 IL19Q9UHD0 177 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 MRPS28Q9Y2Q9 187 aaKnown RBP4.59□□□□□ -1.68
VPS13D-214ENST00000620676 A0A1W2PPE3 182 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 MPTX1A8MV57 137 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 HLA-DOBP13765 273 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 SLC10A1Q14973 349 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF573Q86YE8 665 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 SPICQ8N5J4 248 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 GLIPR2Q9H4G4 154 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 TNFRSF9Q07011 255 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 LINC00299Q6ZSB3 139 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 SCD5Q86SK9 330 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 GVQW1Q8N7I0 195 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 OR5D14Q8NGL3 314 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF318Q5VUA4 2279 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 GRXCR2A6NFK2 248 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 GLTPD2A6NH11 291 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 H0YIV9 168 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF207O43670 478 aaKnown RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 SULT1A3P0DMM9 295 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 SULT1A4P0DMN0 295 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 MMP15P51511 669 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF92Q03936 586 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 RAB32Q13637 225 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ARL6IP1Q15041 203 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 OR1J1Q8NGS3 322 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 NOL4LQ96MY1 436 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 HSPB9Q9BQS6 159 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ARHGAP9Q9BRR9 750 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF552Q9H707 407 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 TARM1B6A8C7 271 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 GPR137BO60478 399 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ABLIM3O94929 683 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 FURINP09958 794 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ECH1Q13011 328 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 Q56UQ5 140 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 FAHD2BQ6P2I3 314 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 FAHD2AQ96GK7 314 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 LAT2Q9GZY6 243 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 SLC35D1Q9NTN3 355 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 PPP1R3CQ9UQK1 317 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 KCNE3Q9Y6H6 103 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 SLC5A10A0PJK1 596 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 CR2P20023 1033 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 PAX5Q02548 391 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 C2orf68Q2NKX9 166 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 COL5A1-AS1Q5SY13 56 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 MANEALQ5VSG8 457 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 CMTM2Q8TAZ6 248 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ASB11Q8WXH4 323 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF689Q96CS4 500 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 SLCO1C1Q9NYB5 712 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 COPS7AQ9UBW8 275 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 FLVCR1Q9Y5Y0 555 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 SFTPDP35247 375 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 H2BFSP57053 126 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 RAB38P57729 211 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 MBLAC1A4D2B0 266 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 H3BQ15 152 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ATXN7O15265 892 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 IGHA1P01876 353 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 IL5P05113 134 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 FAM3BP58499 235 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 NKAIN2Q5VXU1 208 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF808Q8N4W9 903 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 OR6N1Q8NGY5 312 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 GINS3Q9BRX5 216 aa4.58□□□□□ -1.68
VPS13D-214ENST00000620676 RNGTTO60942 597 aaKnown RBP4.58□□□□□ -1.68
VPS13D-214ENST00000620676 CD70P32970 193 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms