RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 OR10H5Q8NGA6 315 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 PTX4Q96A99 478 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 DCBLD2Q96PD2 775 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 MACROD1Q9BQ69 325 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 FN3KRPQ9HA64 309 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 ZDHHC4Q9NPG8 344 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 PPP1R14DQ9NXH3 145 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 TBC1D3DA0A087WVF3 549 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 TBC1D3IA0A087WXS9 549 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 OR52A4PA6NMU1 304 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 TBC1D3LB9A6J9 549 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 EFSO43281 561 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 IFNA2P01563 188 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 CSN2P05814 226 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 ERCC1P07992 297 aaPredicted RBP9.73□□□□□ -0.85
UPF3A-212ENST00000619079 RNF224P0DH78 156 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 HKR1P10072 659 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 CCKBRP32239 447 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 AKR1C3P42330 323 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 PYY3Q5JQD4 70 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 EXOSC6Q5RKV6 272 aaKnown RBP9.73□□□□□ -0.85
UPF3A-212ENST00000619079 NCMAPQ5T1S8 102 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 TBC1D3CQ6IPX1 549 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 REC114Q7Z4M0 266 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 TBC1D3Q8IZP1 549 aaPredicted RBP9.73□□□□□ -0.85
UPF3A-212ENST00000619079 ZNF383Q8NA42 475 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 ZNF511Q8NB15 262 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 WFIKKN2Q8TEU8 576 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 C3orf49Q96BT1 292 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 RASD2Q96D21 266 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 C4orf45Q96LM5 186 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 CHST5Q9GZS9 411 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 RAB18Q9NP72 206 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 OR2S2Q9NQN1 319 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 KLK13Q9UKR3 277 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 TMED7Q9Y3B3 224 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 TMEM184BQ9Y519 407 aaPredicted RBP9.73□□□□□ -0.85
UPF3A-212ENST00000619079 NUMA1Q14980 2115 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 HEATR5BQ9P2D3 2071 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 BDP1A6H8Y1 2624 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 NPIPA5A0A0B4J1W7 369 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 A0A1B0GV90 55 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 PRRT4C9JH25 899 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 NPIPA7E9PJI5 369 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 M0R296 226 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 KCNAB3O43448 404 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 PDGFBP01127 241 aaPredicted RBP9.73□□□□□ -0.85
UPF3A-212ENST00000619079 CISD3P0C7P0 127 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 NPIPA8P0DM63 369 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 C6P13671 934 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 NME1P15531 152 aaKnown RBP9.73□□□□□ -0.85
UPF3A-212ENST00000619079 HIST1H1BP16401 226 aaKnown RBP9.73□□□□□ -0.85
UPF3A-212ENST00000619079 SPCS3P61009 180 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 BTN3A2P78410 334 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 FDX2Q6P4F2 183 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 MAMDC2Q7Z304 686 aaPredicted RBP9.73□□□□□ -0.85
UPF3A-212ENST00000619079 CD163Q86VB7 1156 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 FRMD1Q8N878 549 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 OR51A4Q8NGJ6 313 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 OR10AC1Q8NH08 325 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 LYPD6BQ8NI32 183 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 ZPLD1Q8TCW7 415 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 CYB5D2Q8WUJ1 264 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 GAL3ST3Q96A11 431 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 ISOC2Q96AB3 205 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 LMF1Q96S06 567 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 SPSB2Q99619 263 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 SLC5A7Q9GZV3 580 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 KLHDC2Q9Y2U9 406 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 SIT1Q9Y3P8 196 aa9.73□□□□□ -0.85
UPF3A-212ENST00000619079 A0A087WV62 115 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 MEGF11A6BM72 1044 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 C9JQL5 133 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 AGPAT2O15120 278 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 CST4P01036 141 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 CSTBP04080 98 aaKnown RBP9.72□□□□□ -0.85
UPF3A-212ENST00000619079 IFNA6P05013 189 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 SERPINA5P05154 406 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 AKR1C4P17516 323 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 TLX1P31314 330 aaPredicted RBP9.72□□□□□ -0.85
UPF3A-212ENST00000619079 SULT1A1P50225 295 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 RPS4XP62701 263 aaKnown RBP9.72□□□□□ -0.85
UPF3A-212ENST00000619079 KIAA0141Q14154 515 aaPredicted RBP9.72□□□□□ -0.85
UPF3A-212ENST00000619079 FCRL6Q6DN72 434 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 ZNF550Q7Z398 422 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 FAM24BQ8N5W8 94 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 MFSD9Q8NBP5 474 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 OR2L8Q8NGY9 312 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 SECTM1Q8WVN6 248 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 OR8D1Q8WZ84 308 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 S100PBPQ96BU1 408 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 PTCHD1Q96NR3 888 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 RBM14Q96PK6 669 aaKnown RBP9.72□□□□□ -0.85
UPF3A-212ENST00000619079 KCNK15Q9H427 330 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 WDR76Q9H967 626 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 STARD10Q9Y365 291 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 PCYT1BQ9Y5K3 369 aaPredicted RBP9.72□□□□□ -0.85
UPF3A-212ENST00000619079 LOC390937A0A1W2PQ73 354 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 TSTD3H0UI37 97 aa9.72□□□□□ -0.85
UPF3A-212ENST00000619079 H0YIZ8 118 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms