RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 PCK2Q16822 640 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 KRTAP27-1Q3LI81 207 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 TEX30Q5JUR7 227 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 FAM209AQ5JX71 171 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 SPATA46Q5T0L3 261 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 SLC27A4Q6P1M0 643 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 SHQ1Q6PI26 577 aaKnown RBP13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 CORO6Q6QEF8 472 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 COLCA1Q6ZS62 124 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 ASRGL1Q7L266 308 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 PROKR2Q8NFJ6 384 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 OR5L1Q8NGL2 311 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 ZNRF4Q8WWF5 429 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 SLC7A6Q92536 515 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 PTP4A1Q93096 173 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 APOBEC3DQ96AK3 386 aaPredicted RBP13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 HAVCR1Q96D42 359 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 POM121Q96HA1 1249 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 DIRC2Q96SL1 478 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 CHODLQ9H9P2 273 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 ZDHHC8Q9ULC8 765 aa13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.2□□□□□ -0.3
SRGAP2C-205ENST00000617209 PLSCR5A0PG75 271 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 TIPRLO75663 272 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 DBHP09172 617 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 RAC2P15153 192 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 ZNF23P17027 643 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 ZNF3P17036 446 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 SPI1P17947 270 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 ACHEP22303 614 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 COL8A2P25067 703 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 PYCR1P32322 319 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 CRYBB2P43320 205 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 MAGEB1P43366 347 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 ZNF81P51508 661 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 PSG7Q13046 419 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 CARTPTQ16568 116 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 ZMAT1Q5H9K5 638 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 TMEM255AQ5JRV8 349 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 C1orf146Q5VVC0 180 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 FBXW12Q6X9E4 464 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 CFAP77Q6ZQR2 320 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 HS3ST5Q8IZT8 346 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 PITX2Q99697 317 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 C1QTNF5Q9BXJ0 243 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 BPESC1Q9GZL8 116 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 PNRC2Q9NPJ4 139 aaKnown RBP13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 AP4S1Q9Y587 144 aa13.19□□□□□ -0.3
SRGAP2C-205ENST00000617209 IGHV4-61A0A0C4DH41 118 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 LYNX1G3V0Z9 82 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 LILRA1O75019 489 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 NCR1O76036 304 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 HMGN1P05114 100 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 LYNX1P0DP58 116 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 GZMKP49863 264 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 ERFP50548 548 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 CCL8P80075 99 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 PPP2R2BQ00005 443 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 CCNIQ14094 377 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 GGTLC2Q14390 218 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 GINS1Q14691 196 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 ATP6AP1Q15904 470 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 ALKBH6Q3KRA9 238 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 KRTAP21-3Q3LHN1 58 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 LINC01590Q5TEZ4 76 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 ACSM5Q6NUN0 579 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 FAHD1Q6P587 224 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 LINC00346Q8IVM7 164 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 PARP8Q8N3A8 854 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 ATG16L2Q8NAA4 619 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 OR9Q1Q8NGQ5 310 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 OR5K1Q8NHB7 308 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 HPS1Q92902 700 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 MAP6Q96JE9 813 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 ATF6BQ99941 703 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 DDX28Q9NUL7 540 aaKnown RBP13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 COMMD3-BMI1R4GMX3 469 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 MALRD1Q5VYJ5 2156 aa13.18□□□□□ -0.3
SRGAP2C-205ENST00000617209 RP2O75695 350 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 IGHV1-46P01743 117 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 CD55P08174 381 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 IGHV4-31P0DP07 118 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 FASP25445 335 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 OTX1P32242 354 aaPredicted RBP13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 ENTPD1P49961 510 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 CDK5R2Q13319 367 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 CYB5R2Q6BCY4 276 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 HIPK1Q86Z02 1210 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 ZNF511Q8NB15 262 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 OR51L1Q8NGJ5 315 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 YIPF5Q969M3 257 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 CMBLQ96DG6 245 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 POFUT1Q9H488 388 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 WDR76Q9H967 626 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 MARCH7Q9H992 704 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 SLC25A19Q9HC21 320 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 PURGQ9UJV8 347 aaKnown RBP13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 JMJD1CQ15652 2540 aa13.17□□□□□ -0.3
SRGAP2C-205ENST00000617209 TVP23AA6NH52 213 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms