RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SCG5P05408 212 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 FAM157CP0CG43 387 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 GABRB1P18505 474 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 PLP2Q04941 152 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 SCRN3Q0VDG4 424 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 CDK5R2Q13319 367 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 AQP6Q13520 282 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 GSG1Q2KHT4 349 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 C1QTNF12Q5T7M4 302 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 LINC01590Q5TEZ4 76 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 AGAP6Q5VW22 663 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 OTPQ5XKR4 325 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 LYPD4Q6UWN0 246 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 SHFQ7M4L6 423 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 SLC16A9Q7RTY1 509 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 OR51G2Q8NGK0 314 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 RNFT2Q96EX2 444 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 RHNO1Q9BSD3 238 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 WACQ9BTA9 647 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 CACNG6Q9BXT2 260 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 WDR76Q9H967 626 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 MOV10Q9HCE1 1003 aaKnown RBP12.87□□□□□ -0.35
UBXN1-218ENST00000616865 MRPL22Q9NWU5 206 aaKnown RBP12.87□□□□□ -0.35
UBXN1-218ENST00000616865 ASH2LQ9UBL3 628 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 TIMM10BQ9Y5J6 103 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 CADP27708 2225 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 IQCMA0A1B0GVH7 501 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 SELENOFO60613 162 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 WBP4O75554 376 aaKnown RBP12.86□□□□□ -0.35
UBXN1-218ENST00000616865 PATE4P0C8F1 98 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 PAX7P23759 505 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 RAB1AP62820 205 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 ZNF91Q05481 1191 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 MED21Q13503 144 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 EIF2B1Q14232 305 aaKnown RBP12.86□□□□□ -0.35
UBXN1-218ENST00000616865 ENDOGQ14249 297 aaKnown RBP12.86□□□□□ -0.35
UBXN1-218ENST00000616865 TMEM249Q2WGJ8 235 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 KLHL22Q53GT1 634 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 C11orf71Q6IPW1 123 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 SYT9Q86SS6 491 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 MDP1Q86V88 176 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 LINC00346Q8IVM7 164 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 ALDH16A1Q8IZ83 802 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 WDR31Q8NA23 367 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 GJC3Q8NFK1 279 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 BPIFB6Q8NFQ5 453 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 APH1BQ8WW43 257 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 BOD1Q96IK1 185 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 C1QTNF6Q9BXI9 259 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 YIPF3Q9GZM5 350 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 AMBNQ9NP70 447 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 SCN3BQ9NY72 215 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 LAMP5Q9UJQ1 280 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 CDC42EP3Q9UKI2 254 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 FBXL3Q9UKT7 428 aa12.86□□□□□ -0.35
UBXN1-218ENST00000616865 IRGMA1A4Y4 181 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 ZNF670-ZNF695F2Z2N8 137 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 DENRO43583 198 aaKnown RBP12.85□□□□□ -0.35
UBXN1-218ENST00000616865 APOL3O95236 402 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 F12P00748 615 aaPredicted RBP12.85□□□□□ -0.35
UBXN1-218ENST00000616865 PTHP01270 115 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 DBTP11182 482 aaKnown RBP12.85□□□□□ -0.35
UBXN1-218ENST00000616865 ZNF32P17041 273 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 TTKP33981 857 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 ZNF83P51522 516 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 CSNK2BP67870 215 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 GGTLC2Q14390 218 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 SMN1Q16637 294 aaKnown RBP12.85□□□□□ -0.35
UBXN1-218ENST00000616865 C6orf141Q5SZD1 244 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 TMEM154Q6P9G4 183 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 CORO6Q6QEF8 472 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 CLEC2AQ6UVW9 174 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 DPY19L4Q7Z388 723 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 SLC35F2Q8IXU6 374 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 TIGD4Q8IY51 512 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 PIAS4Q8N2W9 510 aaPredicted RBP12.85□□□□□ -0.35
UBXN1-218ENST00000616865 OR10H4Q8NGA5 316 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 THEM6Q8WUY1 208 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 FBXO17Q96EF6 278 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 RADILQ96JH8 1075 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 MARCH7Q9H992 704 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 CBLN4Q9NTU7 201 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 HAO2Q9NYQ3 351 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 PCDHGB1Q9Y5G3 927 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 SLC25A15Q9Y619 301 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 TMEM14AQ9Y6G1 99 aa12.85□□□□□ -0.35
UBXN1-218ENST00000616865 YLPM1P49750 1951 aaKnown RBP12.85□□□□□ -0.35
UBXN1-218ENST00000616865 EFCAB10A6NFE3 127 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 E7EQL1 145 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 M0R1B8 84 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 SGCEO43556 437 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 DOK2O60496 412 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 FADS2O95864 444 aaKnown RBP12.84□□□□□ -0.35
UBXN1-218ENST00000616865 SBK2P0C263 348 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 CBR1P16152 277 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 RPS27P42677 84 aaKnown RBP12.84□□□□□ -0.35
UBXN1-218ENST00000616865 DSCR9P59020 149 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 LOXL1Q08397 574 aaPredicted RBP12.84□□□□□ -0.35
UBXN1-218ENST00000616865 SPOCK1Q08629 439 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 TAF13Q15543 124 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms