RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 TMEM92Q6UXU6 159 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 FAM213BQ8TBF2 198 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 JAM3Q9BX67 310 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 OR2W5A6NFC9 320 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 CISD3P0C7P0 127 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 NPBWR1P48145 328 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 GABRA4P48169 554 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 GCNT2Q8N0V5 402 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 PPM1DO15297 605 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 FADS1O60427 444 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 TBPP20226 339 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 CDONQ4KMG0 1287 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 IL34Q6ZMJ4 242 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 Q7L0L9 218 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 OR6K3Q8NGY3 331 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 RDH5Q92781 318 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 ZNF707Q96C28 371 aaPredicted RBP18.31■□□□□ 0.52
CTDP1-208ENST00000613122 CNRIP1Q96F85 164 aaPredicted RBP18.31■□□□□ 0.52
CTDP1-208ENST00000613122 FBXL4Q9UKA2 621 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 ELK1P19419 428 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 APEX1P27695 318 aaKnown RBP18.31■□□□□ 0.52
CTDP1-208ENST00000613122 C17orf50Q8WW18 174 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 MYH14Q7Z406 1995 aaKnown RBP18.31■□□□□ 0.52
CTDP1-208ENST00000613122 AGAP14A8MT82 685 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 SNRNP70P08621 437 aaKnown RBP18.31■□□□□ 0.52
CTDP1-208ENST00000613122 ZNF266Q14584 549 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 FBXL14Q8N1E6 418 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 FAM109AQ8N4B1 249 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 S1PR3Q99500 378 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 SLC25A37Q9NYZ2 338 aa18.31■□□□□ 0.52
CTDP1-208ENST00000613122 POU3F3P20264 500 aaPredicted RBP18.3■□□□□ 0.52
CTDP1-208ENST00000613122 MC2RQ01718 297 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 ANKRD53Q8N9V6 530 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 SLC35E1Q96K37 410 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 SLC25A21Q9BQT8 299 aaPredicted RBP18.3■□□□□ 0.52
CTDP1-208ENST00000613122 ETV1P50549 477 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 PKMYT1Q99640 499 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 BIN3Q9NQY0 253 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 RBFOX1Q9NWB1 397 aaKnown RBP18.3■□□□□ 0.52
CTDP1-208ENST00000613122 ZNF705FA8MVS1 300 aaPredicted RBP18.3■□□□□ 0.52
CTDP1-208ENST00000613122 ZNF705DP0CH99 300 aaPredicted RBP18.3■□□□□ 0.52
CTDP1-208ENST00000613122 ZNF705BP0CI00 300 aaPredicted RBP18.3■□□□□ 0.52
CTDP1-208ENST00000613122 PPP3CBP16298 524 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 DOC2BQ14184 412 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 ELFN2Q5R3F8 820 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 ACSM5Q6NUN0 579 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 OR1L3Q8NH93 324 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.3■□□□□ 0.52
CTDP1-208ENST00000613122 TAS2R5Q9NYW4 299 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 IGHV1OR21-1A0A087WYE8 117 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 YIF1AO95070 293 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 PMS2P2O95744 297 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 PRPH2P23942 346 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 SSX2Q16385 188 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 AARDQ4LEZ3 155 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 WIPI1Q5MNZ9 446 aaPredicted RBP18.3■□□□□ 0.52
CTDP1-208ENST00000613122 FJX1Q86VR8 437 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 FAM26EQ8N5C1 309 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 OR13F1Q8NGS4 319 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 COL22A1Q8NFW1 1626 aaPredicted RBP18.3■□□□□ 0.52
CTDP1-208ENST00000613122 DOCK2Q92608 1830 aa18.3■□□□□ 0.52
CTDP1-208ENST00000613122 FITM1A5D6W6 292 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 TNFSF14O43557 240 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 HLA-DOBP13765 273 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 CPEP16870 476 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 NXPH1P58417 271 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 SEH1LQ96EE3 360 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 PBOV1Q9GZY1 135 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 R4GMQ9 66 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 ZNF26P17031 533 aaPredicted RBP18.29■□□□□ 0.52
CTDP1-208ENST00000613122 MEOX1P50221 254 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 FBXO17Q96EF6 278 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 TECTBQ96PL2 329 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 CRISPLD2Q9H0B8 497 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 SSPNQ14714 243 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 HES3Q5TGS1 186 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 NRARPQ7Z6K4 114 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 ADGRF3Q8IZF5 1079 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 GINS3Q9BRX5 216 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 TCRBP04435 133 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 FOLR1P15328 257 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 UBE2FQ969M7 185 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 SPNS1Q9H2V7 528 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 OR2A25A4D2G3 310 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 IGFBP1P08833 259 aaPredicted RBP18.29■□□□□ 0.52
CTDP1-208ENST00000613122 COL9A1P20849 921 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 FAM74A1Q5RGS3 127 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 OR8G2PQ6IF36 304 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 ARV1Q9H2C2 271 aa18.29■□□□□ 0.52
CTDP1-208ENST00000613122 MCCD1P59942 119 aaPredicted RBP18.28■□□□□ 0.52
CTDP1-208ENST00000613122 ALKBH6Q3KRA9 238 aa18.28■□□□□ 0.52
CTDP1-208ENST00000613122 OR51A4Q8NGJ6 313 aa18.28■□□□□ 0.52
CTDP1-208ENST00000613122 OR1J1Q8NGS3 322 aa18.28■□□□□ 0.52
CTDP1-208ENST00000613122 COPS3Q9UNS2 423 aa18.28■□□□□ 0.52
CTDP1-208ENST00000613122 PPP1R3CQ9UQK1 317 aa18.28■□□□□ 0.52
CTDP1-208ENST00000613122 EVPLQ92817 2033 aa18.28■□□□□ 0.52
CTDP1-208ENST00000613122 PAPPAQ13219 1627 aa18.28■□□□□ 0.52
CTDP1-208ENST00000613122 PCK2Q16822 640 aa18.28■□□□□ 0.52
CTDP1-208ENST00000613122 MRPS24Q96EL2 167 aaKnown RBP18.28■□□□□ 0.52
CTDP1-208ENST00000613122 SMOC1Q9H4F8 434 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms