RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 LINC01006Q8NI28 216 aa19.46■□□□□ 0.71
MMP28-203ENST00000612672 FNDC8Q8TC99 324 aa19.46■□□□□ 0.71
MMP28-203ENST00000612672 LRRC8CQ8TDW0 803 aa19.46■□□□□ 0.71
MMP28-203ENST00000612672 RASSF5Q8WWW0 418 aa19.46■□□□□ 0.71
MMP28-203ENST00000612672 POLR2J2Q9GZM3 115 aaKnown RBP19.46■□□□□ 0.71
MMP28-203ENST00000612672 POLR2J3Q9H1A7 115 aaKnown RBP19.46■□□□□ 0.71
MMP28-203ENST00000612672 NOX4Q9NPH5 578 aa19.46■□□□□ 0.71
MMP28-203ENST00000612672 TUBG2Q9NRH3 451 aa19.46■□□□□ 0.71
MMP28-203ENST00000612672 CTSZQ9UBR2 303 aa19.46■□□□□ 0.71
MMP28-203ENST00000612672 CLN8Q9UBY8 286 aa19.46■□□□□ 0.71
MMP28-203ENST00000612672 RNF114Q9Y508 228 aa19.46■□□□□ 0.71
MMP28-203ENST00000612672 TIMM23O14925 209 aa19.45■□□□□ 0.7
MMP28-203ENST00000612672 ANGPT2O15123 496 aa19.45■□□□□ 0.7
MMP28-203ENST00000612672 CRYBA1P05813 215 aa19.45■□□□□ 0.7
MMP28-203ENST00000612672 CFHR2P36980 270 aa19.45■□□□□ 0.7
MMP28-203ENST00000612672 PROK1P58294 105 aa19.45■□□□□ 0.7
MMP28-203ENST00000612672 ZNF181Q2M3W8 571 aa19.45■□□□□ 0.7
MMP28-203ENST00000612672 FBXW12Q6X9E4 464 aa19.45■□□□□ 0.7
MMP28-203ENST00000612672 TMEM86BQ8N661 226 aa19.45■□□□□ 0.7
MMP28-203ENST00000612672 BHLHE23Q8NDY6 225 aa19.45■□□□□ 0.7
MMP28-203ENST00000612672 PLEKHA8Q96JA3 519 aa19.45■□□□□ 0.7
MMP28-203ENST00000612672 SLC30A2Q9BRI3 323 aa19.45■□□□□ 0.7
MMP28-203ENST00000612672 PCGF1Q9BSM1 259 aa19.45■□□□□ 0.7
MMP28-203ENST00000612672 WDR76Q9H967 626 aa19.45■□□□□ 0.7
MMP28-203ENST00000612672 CENPVL3A0A0U1RRI6 287 aa19.44■□□□□ 0.7
MMP28-203ENST00000612672 IFNL4K9M1U5 179 aa19.44■□□□□ 0.7
MMP28-203ENST00000612672 FXYD1O00168 92 aa19.44■□□□□ 0.7
MMP28-203ENST00000612672 TNFRSF13BO14836 293 aaPredicted RBP19.44■□□□□ 0.7
MMP28-203ENST00000612672 HLA-DPB1P04440 258 aa19.44■□□□□ 0.7
MMP28-203ENST00000612672 CPT2P23786 658 aa19.44■□□□□ 0.7
MMP28-203ENST00000612672 GUCA1AP43080 201 aaPredicted RBP19.44■□□□□ 0.7
MMP28-203ENST00000612672 FAM205BPQ63HN1 556 aa19.44■□□□□ 0.7
MMP28-203ENST00000612672 NANOGP8Q6NSW7 305 aa19.44■□□□□ 0.7
MMP28-203ENST00000612672 NRMQ8IXM6 262 aa19.44■□□□□ 0.7
MMP28-203ENST00000612672 Q96M85 177 aa19.44■□□□□ 0.7
MMP28-203ENST00000612672 ASH2LQ9UBL3 628 aa19.44■□□□□ 0.7
MMP28-203ENST00000612672 A6NIZ1 184 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 SLC22A31A6NKX4 558 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 PHYHO14832 338 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 GPR137BO60478 399 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 FCN3O75636 299 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 CLPXO76031 633 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 IGHV4-59P01825 116 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 RAP1BP61224 184 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 RAP1AP62834 184 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 ZNF620Q6ZNG0 422 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 OR13G1Q8NGZ3 307 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 OR1F12Q8NHA8 337 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 UBE2FQ969M7 185 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 RHCGQ9UBD6 479 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 BAG5Q9UL15 447 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 TMCC3Q9ULS5 477 aa19.43■□□□□ 0.7
MMP28-203ENST00000612672 A0A1B0GWJ7 208 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 CDC42EP2O14613 210 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 RER1O15258 196 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 FSTL3O95633 263 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 PSMB10P40306 273 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 SRP9P49458 86 aaKnown RBP19.42■□□□□ 0.7
MMP28-203ENST00000612672 MAB21L1Q13394 359 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 AQP6Q13520 282 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 TAF9Q16594 264 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 CLEC12AQ5QGZ9 265 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 DCDC5Q6ZRR9 648 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 FAM122BQ7Z309 247 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 PCYOX1LQ8NBM8 494 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 PRRC1Q96M27 445 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 WACQ9BTA9 647 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 SNX13Q9Y5W8 968 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 POMT1Q9Y6A1 747 aa19.42■□□□□ 0.7
MMP28-203ENST00000612672 TEX13CA0A0J9YWL9 993 aa19.41■□□□□ 0.7
MMP28-203ENST00000612672 IQCF6A8MYZ5 107 aa19.41■□□□□ 0.7
MMP28-203ENST00000612672 J3KTA2 159 aa19.41■□□□□ 0.7
MMP28-203ENST00000612672 YAP1P46937 504 aaKnown RBP19.41■□□□□ 0.7
MMP28-203ENST00000612672 DBPQ10586 325 aaPredicted RBP19.41■□□□□ 0.7
MMP28-203ENST00000612672 CYBRD1Q53TN4 286 aa19.41■□□□□ 0.7
MMP28-203ENST00000612672 PRAMEF6Q5VXH4 476 aa19.41■□□□□ 0.7
MMP28-203ENST00000612672 NLRC3Q7RTR2 1065 aa19.41■□□□□ 0.7
MMP28-203ENST00000612672 FAM110DQ8TAY7 271 aaPredicted RBP19.41■□□□□ 0.7
MMP28-203ENST00000612672 RASD2Q96D21 266 aa19.41■□□□□ 0.7
MMP28-203ENST00000612672 FAM71F1Q96KD3 344 aaPredicted RBP19.41■□□□□ 0.7
MMP28-203ENST00000612672 RABEP2Q9H5N1 569 aa19.41■□□□□ 0.7
MMP28-203ENST00000612672 SMURF1Q9HCE7 757 aa19.41■□□□□ 0.7
MMP28-203ENST00000612672 ENSAO43768 121 aaKnown RBP19.4■□□□□ 0.7
MMP28-203ENST00000612672 FAM20BO75063 409 aa19.4■□□□□ 0.7
MMP28-203ENST00000612672 VIMP08670 466 aaKnown RBP19.4■□□□□ 0.7
MMP28-203ENST00000612672 SLC9A3P48764 834 aa19.4■□□□□ 0.7
MMP28-203ENST00000612672 RAD23AP54725 363 aa19.4■□□□□ 0.7
MMP28-203ENST00000612672 PRKCDQ05655 676 aa19.4■□□□□ 0.7
MMP28-203ENST00000612672 MPPED2Q15777 294 aa19.4■□□□□ 0.7
MMP28-203ENST00000612672 RSPO1Q2MKA7 263 aaPredicted RBP19.4■□□□□ 0.7
MMP28-203ENST00000612672 OAFQ86UD1 273 aa19.4■□□□□ 0.7
MMP28-203ENST00000612672 SSMEM1Q8WWF3 244 aa19.4■□□□□ 0.7
MMP28-203ENST00000612672 COG8Q96MW5 612 aa19.4■□□□□ 0.7
MMP28-203ENST00000612672 ZNF582Q96NG8 517 aaPredicted RBP19.4■□□□□ 0.7
MMP28-203ENST00000612672 COA3Q9Y2R0 106 aaPredicted RBP19.4■□□□□ 0.7
MMP28-203ENST00000612672 TET2Q6N021 2002 aaPredicted RBP19.39■□□□□ 0.69
MMP28-203ENST00000612672 A0A0U1RQK1 487 aa19.39■□□□□ 0.69
MMP28-203ENST00000612672 PRSS37A4D1T9 235 aa19.39■□□□□ 0.69
MMP28-203ENST00000612672 EFCAB9A8MZ26 197 aa19.39■□□□□ 0.69
MMP28-203ENST00000612672 ZNF879B4DU55 563 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms