RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PIN1P1O15428 100 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 RGS5O15539 181 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 RRP8O43159 456 aaKnown RBP7.84□□□□□ -1.15
CCDC47-207ENST00000612558 NCR1O76036 304 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 RAF1P04049 648 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 YES1P07947 543 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 SRMP19623 302 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 RAB3BP20337 219 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 HSD11B1P28845 292 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 CD40LGP29965 261 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 ETV6P41212 452 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 MFGE8Q08431 387 aaPredicted RBP7.84□□□□□ -1.15
CCDC47-207ENST00000612558 ENDOGQ14249 297 aaKnown RBP7.84□□□□□ -1.15
CCDC47-207ENST00000612558 TAF13Q15543 124 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 STK11Q15831 433 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 C3AR1Q16581 482 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 FREM1Q5H8C1 2179 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 SPANXN2Q5MJ10 180 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 DDI2Q5TDH0 399 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 MZT2AQ6P582 158 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 C16orf87Q6PH81 154 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 ZNF704Q6ZNC4 412 aaPredicted RBP7.84□□□□□ -1.15
CCDC47-207ENST00000612558 CCDC190Q86UF4 302 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 RTTNQ86VV8 2226 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 RDH10Q8IZV5 341 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 ACOT12Q8WYK0 555 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 HTRA1Q92743 480 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 DERL3Q96Q80 235 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 ATF6BQ99941 703 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 LINC00470Q9BZP3 86 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 PRDM14Q9GZV8 571 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 SLCO5A1Q9H2Y9 848 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 GPR35Q9HC97 309 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 GP6Q9HCN6 339 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 G6PC2Q9NQR9 355 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 TMEM38BQ9NVV0 291 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 OR52A1Q9UKL2 312 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 SLC22A13Q9Y226 551 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 EMC9Q9Y3B6 208 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 CMAHPQ9Y471 501 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 ZNF175Q9Y473 711 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 PIEZO1Q92508 2521 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 CACNA1GO43497 2377 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 ACOD1A6NK06 481 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 SLC22A20A6NK97 555 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 J3QRK9 145 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 K7ENP7 123 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 PDCD5O14737 125 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 KRT33AO76009 404 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 ISG15P05161 165 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 CST2P09228 141 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 FCGR2AP12318 317 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 TNFSF8P32971 234 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 PPP5CP53041 499 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 GRB2P62993 217 aaKnown RBP7.84□□□□□ -1.15
CCDC47-207ENST00000612558 HIST1H3AP68431 136 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 ODF4Q2M2E3 257 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 CEACAM16Q2WEN9 425 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 NRN1LQ496H8 165 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 CEP78Q5JTW2 689 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 BCL2L15Q5TBC7 163 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 HIST2H3PS2Q5TEC6 136 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 RPUSD3Q6P087 351 aaKnown RBP7.84□□□□□ -1.15
CCDC47-207ENST00000612558 INO80CQ6PI98 192 aaPredicted RBP7.84□□□□□ -1.15
CCDC47-207ENST00000612558 PLXDC2Q6UX71 529 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 HIST2H3AQ71DI3 136 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 LINGO2Q7L985 606 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 NR2C2APQ86WQ0 139 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 SIAH3Q8IW03 269 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 LRRC18Q8N456 261 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 PPP1R14AQ96A00 147 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 SARAFQ96BY9 339 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 WDFY2Q96P53 400 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 ALKBH3Q96Q83 286 aaPredicted RBP7.84□□□□□ -1.15
CCDC47-207ENST00000612558 TAAR6Q96RI8 345 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 FOXB1Q99853 325 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 SLC30A2Q9BRI3 323 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 SLITRK2Q9H156 845 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 ZCCHC4Q9H5U6 513 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 MOB1AQ9H8S9 216 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 CALHM2Q9HA72 323 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 ABCB9Q9NP78 766 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 PNRC2Q9NPJ4 139 aaKnown RBP7.84□□□□□ -1.15
CCDC47-207ENST00000612558 DDX28Q9NUL7 540 aaKnown RBP7.84□□□□□ -1.15
CCDC47-207ENST00000612558 FAM206AQ9NX38 181 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 MAP1BP46821 2468 aaKnown RBP7.83□□□□□ -1.16
CCDC47-207ENST00000612558 SVILO95425 2214 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 TRBV5-7A0A0A0MS05 114 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 A0A0G2JK05 382 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 NOTOA8MTQ0 251 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 RPL36A-HNRNPH2H7BZ11 118 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 TGM6O95932 706 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 PDGFAP04085 211 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 UBCP0CG48 685 aaKnown RBP7.83□□□□□ -1.16
CCDC47-207ENST00000612558 ACHEP22303 614 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 CTSSP25774 331 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 MAGEB1P43366 347 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 SOX2P48431 317 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 OR10A3P58181 314 aa7.83□□□□□ -1.16
CCDC47-207ENST00000612558 PSMA6P60900 246 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms