RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 CADM1Q9BY67 442 aaKnown RBP11.44□□□□□ -0.58
SENP3-209ENST00000610454 MMADHCQ9H3L0 296 aaPredicted RBP11.44□□□□□ -0.58
SENP3-209ENST00000610454 NKIRAS2Q9NYR9 191 aa11.44□□□□□ -0.58
SENP3-209ENST00000610454 KIF17Q9P2E2 1029 aa11.44□□□□□ -0.58
SENP3-209ENST00000610454 DNAJB9Q9UBS3 223 aa11.44□□□□□ -0.58
SENP3-209ENST00000610454 ZDHHC8Q9ULC8 765 aa11.44□□□□□ -0.58
SENP3-209ENST00000610454 YLPM1P49750 1951 aaKnown RBP11.43□□□□□ -0.58
SENP3-209ENST00000610454 IGHV1-69-2A0A0G2JMI3 117 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 TCRBV3S1A0A5B6 114 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 PPIHO43447 177 aaKnown RBP11.43□□□□□ -0.58
SENP3-209ENST00000610454 CDC14BO60729 498 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 DEAF1O75398 565 aaPredicted RBP11.43□□□□□ -0.58
SENP3-209ENST00000610454 NCR1O76036 304 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 TFP02787 698 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 IGHV4-31P0DP07 118 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 PAICSP22234 425 aaKnown RBP11.43□□□□□ -0.58
SENP3-209ENST00000610454 TNFSF4P23510 183 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 FMO3P31513 532 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 RIN1Q13671 783 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 CRMP1Q14194 572 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 FAM209AQ5JX71 171 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 C1orf146Q5VVC0 180 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 FAM166AQ6J272 317 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 SLC18B1Q6NT16 456 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 CD300LDQ6UXZ3 194 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 ATG16L2Q8NAA4 619 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 OR9Q1Q8NGQ5 310 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 OR6K6Q8NGW6 343 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 OR4Q3Q8NH05 313 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 APOBEC3DQ96AK3 386 aaPredicted RBP11.43□□□□□ -0.58
SENP3-209ENST00000610454 DIRC2Q96SL1 478 aa11.43□□□□□ -0.58
SENP3-209ENST00000610454 ZNF275Q9NSD4 429 aaPredicted RBP11.43□□□□□ -0.58
SENP3-209ENST00000610454 LOC100289279A0A1B0GTE1 492 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 LRP5LA4QPB2 252 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 F5H5K5 113 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 CRLF1O75462 422 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 CIB2O75838 187 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 DBHP09172 617 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 TACSTD2P09758 323 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 ANXA8P13928 327 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 COL8A2P25067 703 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 GRK5P34947 590 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 MMP15P51511 669 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 BLVRAP53004 296 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 TMEM33P57088 247 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 HIST1H3AP68431 136 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 DBPQ10586 325 aaPredicted RBP11.42□□□□□ -0.58
SENP3-209ENST00000610454 PSG7Q13046 419 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 HFEQ30201 348 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 HIST2H3PS2Q5TEC6 136 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 SLC27A4Q6P1M0 643 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 CFAP77Q6ZQR2 320 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 USP51Q70EK9 711 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 HIST2H3AQ71DI3 136 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 OR51L1Q8NGJ5 315 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 GTF3AQ92664 365 aaKnown RBP11.42□□□□□ -0.58
SENP3-209ENST00000610454 HPS1Q92902 700 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 PTP4A1Q93096 173 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 SPTSSAQ969W0 71 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 CMBLQ96DG6 245 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 ELMOD3Q96FG2 381 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 PLEKHA8Q96JA3 519 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 CMC2Q9NRP2 79 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 PTTG3PQ9NZH4 202 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 CYB5R1Q9UHQ9 305 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 PURGQ9UJV8 347 aaKnown RBP11.42□□□□□ -0.58
SENP3-209ENST00000610454 KCNS2Q9ULS6 477 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 STARD10Q9Y365 291 aa11.42□□□□□ -0.58
SENP3-209ENST00000610454 TVP23AA6NH52 213 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 ZSCAN5BA6NJL1 495 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 CLDN25C9JDP6 229 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 IGHV1-46P01743 117 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 GYPBP06028 91 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 SPARCP09486 303 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 RAC2P15153 192 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 SPI1P17947 270 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 GGT2P36268 569 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 SLC6A9P48067 706 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 SLC25A1P53007 311 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 TPTEP56180 551 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 MALLQ13021 153 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 CCNIQ14094 377 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 TAF13Q15543 124 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 KRTAP21-3Q3LHN1 58 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 CHRFAM7AQ494W8 412 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 TMEM179BQ7Z7N9 219 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 IQCF1Q8N6M8 205 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 PAPD5Q8NDF8 572 aaKnown RBP11.41□□□□□ -0.58
SENP3-209ENST00000610454 DNAJC9Q8WXX5 260 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 YIPF5Q969M3 257 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 TIMD4Q96H15 378 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 RBM4Q9BWF3 364 aaKnown RBP11.41□□□□□ -0.58
SENP3-209ENST00000610454 HCAR1Q9BXC0 346 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 NARFLQ9H6Q4 476 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 MSL2Q9HCI7 577 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 MRPL22Q9NWU5 206 aaKnown RBP11.41□□□□□ -0.58
SENP3-209ENST00000610454 CDC42EP3Q9UKI2 254 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 COMMD3-BMI1R4GMX3 469 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 JMJD1CQ15652 2540 aa11.41□□□□□ -0.58
SENP3-209ENST00000610454 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.4□□□□□ -0.589e-11■■□□□ 11.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms