RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 NT5CQ8TCD5 201 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 PPP1R1CQ8WVI7 109 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 PHYHIPQ92561 330 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 CDC6Q99741 560 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 ABHD6Q9BV23 337 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 OR51B6Q9H340 312 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 MMP25Q9NPA2 562 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 HRH3Q9Y5N1 445 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 MYO18BQ8IUG5 2567 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 C7orf66A4D0T2 115 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 LMO7DNF2Z398 122 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 KIR2DL1P43626 348 aaPredicted RBP9.36□□□□□ -0.91
CTCFL-216ENST00000608263 TUSC1Q2TAM9 212 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 TMEM81Q6P7N7 255 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 DEFB124Q8NES8 71 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 ZNRF4Q8WWF5 429 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 ARL11Q969Q4 196 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 RADILQ96JH8 1075 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 EHFQ9NZC4 300 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 B4GALT7Q9UBV7 327 aa9.36□□□□□ -0.91
CTCFL-216ENST00000608263 D6RAR5 112 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 RAB6AP20340 208 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 BDKRB2P30411 391 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 RPL27P61353 136 aaKnown RBP9.35□□□□□ -0.91
CTCFL-216ENST00000608263 RIN1Q13671 783 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 TMEM255AQ5JRV8 349 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 FJX1Q86VR8 437 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 UEVLDQ8IX04 471 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 GVQW1Q8N7I0 195 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 OR11G2Q8NGC1 345 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 OR51A2Q8NGJ7 313 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 HAVCR2Q8TDQ0 301 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 ANKRD9Q96BM1 317 aaPredicted RBP9.35□□□□□ -0.91
CTCFL-216ENST00000608263 ZNF768Q9H5H4 540 aaKnown RBP9.35□□□□□ -0.91
CTCFL-216ENST00000608263 PRR13Q9NZ81 148 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 ELF5Q9UKW6 265 aaPredicted RBP9.35□□□□□ -0.91
CTCFL-216ENST00000608263 PIN1P1O15428 100 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 OGG1O15527 345 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 XRCC3O43542 346 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 PIAS2O75928 621 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 SYNGR4O95473 234 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 SERPINA5P05154 406 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 GDF1P27539 372 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 ACSM1Q08AH1 577 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 SLC17A1Q14916 467 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 LRRTM1Q86UE6 522 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 ZNF679Q8IYX0 411 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 LSMEM1Q8N8F7 131 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 ZNF75AQ96N20 296 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 CNTNAP3BQ96NU0 1288 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 TRAF4Q9BUZ4 470 aaPredicted RBP9.35□□□□□ -0.91
CTCFL-216ENST00000608263 JAM3Q9BX67 310 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 POLE3Q9NRF9 147 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 ZNF223Q9UK11 482 aaPredicted RBP9.35□□□□□ -0.91
CTCFL-216ENST00000608263 NLRC5Q86WI3 1866 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 A0A1W2PNR3 127 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 M0R296 226 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 CYR61O00622 381 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 ALOX12BO75342 701 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 PMS2P2O95744 297 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 HLA-DQB1P01920 261 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 ERGP11308 486 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 CXCL2P19875 107 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 ENPP1P22413 925 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 ACAA2P42765 397 aaKnown RBP9.35□□□□□ -0.91
CTCFL-216ENST00000608263 CBX5P45973 191 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 STK11Q15831 433 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 STT3BQ8TCJ2 826 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 MARCH1Q8TCQ1 289 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 ADAMTS18Q8TE60 1221 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 SORCS2Q96PQ0 1159 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 ZNF416Q9BWM5 594 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 CHRNA9Q9UGM1 479 aa9.35□□□□□ -0.91
CTCFL-216ENST00000608263 FAM230AA0A1W2PPH8 454 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 SSX5O60225 188 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 ZFAND5O76080 213 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 CBR1P16152 277 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 GALP22466 123 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 HRH1P35367 487 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 ZNF93P35789 620 aaPredicted RBP9.34□□□□□ -0.91
CTCFL-216ENST00000608263 PPT1P50897 306 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 FZD2Q14332 565 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 RBM39Q14498 530 aaKnown RBP9.34□□□□□ -0.91
CTCFL-216ENST00000608263 TMEM176BQ3YBM2 270 aaPredicted RBP9.34□□□□□ -0.91
CTCFL-216ENST00000608263 CLVS2Q5SYC1 327 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 DCAF12L2Q5VW00 463 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 ADGRE4PQ86SQ3 457 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 ZNF100Q8IYN0 542 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 FAM181AQ8N9Y4 354 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 OR51E1Q8TCB6 317 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 RPS10P5Q9NQ39 176 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 ZNF230Q9UIE0 474 aaPredicted RBP9.34□□□□□ -0.91
CTCFL-216ENST00000608263 MED13LQ71F56 2210 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 SPG11Q96JI7 2443 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 A0A0D9SG52 128 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 H7C417 338 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 NUDT21O43809 227 aaKnown RBP9.34□□□□□ -0.91
CTCFL-216ENST00000608263 PTP4A3O75365 173 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 TGM6O95932 706 aa9.34□□□□□ -0.91
CTCFL-216ENST00000608263 RRASP10301 218 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms