RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 F5H5K5 113 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 GPRIN2O60269 458 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 CD8AP01732 235 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 GCH1P30793 250 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 HTR1FP30939 366 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 WNT5AP41221 380 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 TPTEP56180 551 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 SNRPGP62308 76 aaKnown RBP12.28□□□□□ -0.44
CTSA-219ENST00000607841 GGTLC2Q14390 218 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 MOGQ16653 247 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 ZNF718Q3SXZ3 478 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 SLC25A30Q5SVS4 291 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 TTC23Q5W5X9 447 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 SLC16A9Q7RTY1 509 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 LRRC75A-AS1Q8N1F1 130 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 OR5L1Q8NGL2 311 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 OTOSQ8NHW6 89 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 ABHD4Q8TB40 342 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 ST7LQ8TDW4 575 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 SLC7A6Q92536 515 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 SLAMF6Q96DU3 332 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 CNN2Q99439 309 aaKnown RBP12.28□□□□□ -0.44
CTSA-219ENST00000607841 FOXC2Q99958 501 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 APOL4Q9BPW4 351 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 COPS4Q9BT78 406 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 YIPF3Q9GZM5 350 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 PNRC2Q9NPJ4 139 aaKnown RBP12.28□□□□□ -0.44
CTSA-219ENST00000607841 CENPMQ9NSP4 180 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 HAO2Q9NYQ3 351 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 DUSP13Q9UII6 198 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 GPR160Q9UJ42 338 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 LAMP5Q9UJQ1 280 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.28□□□□□ -0.44
CTSA-219ENST00000607841 TMEM14AQ9Y6G1 99 aa12.28□□□□□ -0.44
CTSA-219ENST00000607841 H3BSA7 217 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 OVOL3O00110 214 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 SELENOFO60613 162 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 APOC1P02654 83 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 LYNP07948 512 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 DBHP09172 617 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 ZNF250P15622 560 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 PAX1P15863 534 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 NAA10P41227 235 aaPredicted RBP12.27□□□□□ -0.45
CTSA-219ENST00000607841 GRB2P62993 217 aaKnown RBP12.27□□□□□ -0.45
CTSA-219ENST00000607841 POU4F2Q12837 409 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 SWI5Q1ZZU3 235 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 MST1LQ2TV78 715 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 KRTAP27-1Q3LI81 207 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 C11orf71Q6IPW1 123 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 BCDIN3DQ7Z5W3 292 aaKnown RBP12.27□□□□□ -0.45
CTSA-219ENST00000607841 ZNF101Q8IZC7 436 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 SYNPRQ8TBG9 265 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 THEM6Q8WUY1 208 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 APOBEC3DQ96AK3 386 aaPredicted RBP12.27□□□□□ -0.45
CTSA-219ENST00000607841 Q96MT0 163 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 ZNF582Q96NG8 517 aaPredicted RBP12.27□□□□□ -0.45
CTSA-219ENST00000607841 MNTQ99583 582 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 ABHD6Q9BV23 337 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 CACNG6Q9BXT2 260 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 GSX2Q9BZM3 304 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 ZNF701Q9NV72 531 aaPredicted RBP12.27□□□□□ -0.45
CTSA-219ENST00000607841 NKX1-2Q9UD57 310 aaPredicted RBP12.27□□□□□ -0.45
CTSA-219ENST00000607841 ITGB1BP2Q9UKP3 347 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 CSMD1Q96PZ7 3565 aa12.27□□□□□ -0.45
CTSA-219ENST00000607841 ABCA12Q86UK0 2595 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 A0A1W2PPW3 197 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 M0R135 149 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 PHYHO14832 338 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 NGFP01138 241 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 MRPL3P09001 348 aaKnown RBP12.26□□□□□ -0.45
CTSA-219ENST00000607841 PSKH1P11801 424 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 HSD11B1P28845 292 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 ATP6V1E1P36543 226 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 CDKN1AP38936 164 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 ART1P52961 327 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 KLF3P57682 345 aaPredicted RBP12.26□□□□□ -0.45
CTSA-219ENST00000607841 PPP1CBP62140 327 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 RIPK1Q13546 671 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 OCLNQ16625 522 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 KCTD18Q6PI47 426 aaPredicted RBP12.26□□□□□ -0.45
CTSA-219ENST00000607841 DRAM2Q6UX65 266 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 RFPL4BQ6ZWI9 263 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.26□□□□□ -0.45
CTSA-219ENST00000607841 DHRSXQ8N5I4 330 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 OR10S1Q8NGN2 331 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 SLC25A40Q8TBP6 338 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 RNF133Q8WVZ7 376 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 UBE2FQ969M7 185 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 ZNF799Q96GE5 643 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 DOK1Q99704 481 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 KCNJ15Q99712 375 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 MRPL37Q9BZE1 423 aaKnown RBP12.26□□□□□ -0.45
CTSA-219ENST00000607841 VCX3BQ9H321 246 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 SP140LQ9H930 580 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 SLCO1C1Q9NYB5 712 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 DNAJC27Q9NZQ0 273 aa12.26□□□□□ -0.45
CTSA-219ENST00000607841 H7C417 338 aa12.25□□□□□ -0.45
CTSA-219ENST00000607841 DLGAP1O14490 977 aa12.25□□□□□ -0.45
CTSA-219ENST00000607841 MT-ND5P03915 603 aa12.25□□□□□ -0.45
CTSA-219ENST00000607841 LCATP04180 440 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms