RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 FAM120AOSQ5T036 256 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 ZNF362Q5T0B9 420 aaPredicted RBP10.44□□□□□ -0.74
CTSA-210ENST00000606000 SLC18B1Q6NT16 456 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 RASSF6Q6ZTQ3 369 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 SLC37A3Q8NCC5 494 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 OR10G2Q8NGC3 310 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 CANT1Q8WVQ1 401 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 CMBLQ96DG6 245 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 DDOQ99489 341 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 REEP1Q9H902 201 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 SAP30LQ9HAJ7 183 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 PNRC2Q9NPJ4 139 aaKnown RBP10.44□□□□□ -0.74
CTSA-210ENST00000606000 DECR2Q9NUI1 292 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 TBCCD1Q9NVR7 557 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 TMEM160Q9NX00 188 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 NKIRAS2Q9NYR9 191 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 KLHL21Q9UJP4 597 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 PURGQ9UJV8 347 aaKnown RBP10.44□□□□□ -0.74
CTSA-210ENST00000606000 CDC42EP3Q9UKI2 254 aa10.44□□□□□ -0.74
CTSA-210ENST00000606000 NIPBLQ6KC79 2804 aaeCLIP10.43□□□□□ -0.74
CTSA-210ENST00000606000 PLSCR5A0PG75 271 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 MT-ND5P03915 603 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 GYPBP06028 91 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 FAM157CP0CG43 387 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 RAP2AP10114 183 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 CLUP10909 449 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 SRSF2Q01130 221 aaKnown RBP10.43□□□□□ -0.74
CTSA-210ENST00000606000 CRMP1Q14194 572 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 CR1LQ2VPA4 569 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 ARL9Q6T311 187 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 UNQ6126/PRO20091Q6UXV3 157 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 NAA40Q86UY6 237 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 HS3ST5Q8IZT8 346 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 OR5AS1Q8N127 324 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 IQCF1Q8N6M8 205 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 LINC01356Q8N9X3 169 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 OR10S1Q8NGN2 331 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 HPS1Q92902 700 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 MAP6Q96JE9 813 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 CHID1Q9BWS9 393 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 TSSK6Q9BXA6 273 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 BEX2Q9BXY8 128 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 SHARPINQ9H0F6 387 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 WDR76Q9H967 626 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 IL20Q9NYY1 176 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 TLN2Q9Y4G6 2542 aa10.43□□□□□ -0.74
CTSA-210ENST00000606000 DHRS12A0PJE2 317 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 H3BSA7 217 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 GYG2O15488 501 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 IDH3BO43837 385 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 CST1P01037 141 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 GSTM3P21266 225 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 TMEM33P57088 247 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 LMO4P61968 165 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 TNFAIP6P98066 277 aaPredicted RBP10.42□□□□□ -0.74
CTSA-210ENST00000606000 MOGQ16653 247 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 FAM209AQ5JX71 171 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 RPL13AP3Q6NVV1 102 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 PGM2L1Q6PCE3 622 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 LINC00471Q8N535 108 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 PROKR2Q8NFJ6 384 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 GJC3Q8NFK1 279 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 CCL17Q92583 94 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 C1orf159Q96HA4 380 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 COQ7Q99807 217 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 HCAR1Q9BXC0 346 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 DGCR6LQ9BY27 220 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 HDHD2Q9H0R4 259 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 CYB5R1Q9UHQ9 305 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 WIPI2Q9Y4P8 454 aa10.42□□□□□ -0.74
CTSA-210ENST00000606000 C5orf63A6NC05 138 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 AQP12BA6NM10 295 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 CLDN25C9JDP6 229 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 F5H5K5 113 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 H0YL77 283 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 RRP9O43818 475 aaKnown RBP10.41□□□□□ -0.74
CTSA-210ENST00000606000 CD55P08174 381 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 ADH4P08319 380 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 ACSM4P0C7M7 580 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 KITLGP21583 273 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 TRAP1Q12931 704 aaKnown RBP10.41□□□□□ -0.74
CTSA-210ENST00000606000 CDK5R2Q13319 367 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 FLOT2Q14254 428 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 HFEQ30201 348 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 KRTAP27-1Q3LI81 207 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 SLC36A3Q495N2 470 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 DNAL1Q4LDG9 190 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 OR2T2Q6IF00 324 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 SPATA24Q86W54 205 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 AQP12AQ8IXF9 295 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 C1orf174Q8IYL3 243 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 LNX2Q8N448 690 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 ZNF511Q8NB15 262 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 BHLHE23Q8NDY6 225 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 OR2Z1Q8NG97 314 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 OR10AD1Q8NGE0 317 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 OR2AJ1Q8NGZ0 328 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 GIPC3Q8TF64 312 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 HAVCR1Q96D42 359 aa10.41□□□□□ -0.74
CTSA-210ENST00000606000 ELMOD3Q96FG2 381 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms