RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 TBCCD1Q9NVR7 557 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 USE1Q9NZ43 259 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 GRIP1Q9Y3R0 1128 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 YLPM1P49750 1951 aaKnown RBP12.19□□□□□ -0.46
TUBE1-211ENST00000605457 CSPG4Q6UVK1 2322 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 ANKRD65E5RJM6 399 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 M0R129 80 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 ZNF593O00488 134 aaPredicted RBP12.19□□□□□ -0.46
TUBE1-211ENST00000605457 PRKYO43930 277 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 CLPTM1O96005 669 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 SPARCP09486 303 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 GSTT1P30711 240 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 POLR2IP36954 125 aaKnown RBP12.19□□□□□ -0.46
TUBE1-211ENST00000605457 ALDH3A2P51648 485 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 EFNB1P98172 346 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 ECH1Q13011 328 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 RSPO1Q2MKA7 263 aaPredicted RBP12.19□□□□□ -0.46
TUBE1-211ENST00000605457 DNM1P46Q6ZS02 220 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 DCXRQ7Z4W1 244 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 ERI1Q8IV48 349 aaKnown RBP12.19□□□□□ -0.46
TUBE1-211ENST00000605457 TIGD4Q8IY51 512 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 CBR4Q8N4T8 237 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 SYNPRQ8TBG9 265 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 SLC25A40Q8TBP6 338 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 ST7LQ8TDW4 575 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 ZMYND19Q96E35 227 aaPredicted RBP12.19□□□□□ -0.46
TUBE1-211ENST00000605457 DCLRE1CQ96SD1 692 aaKnown RBP12.19□□□□□ -0.46
TUBE1-211ENST00000605457 INTS14Q96SY0 518 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 VRK1Q99986 396 aaPredicted RBP12.19□□□□□ -0.46
TUBE1-211ENST00000605457 TMUB1Q9BVT8 246 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 RIBC2Q9H4K1 309 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 DYNLRB1Q9NP97 96 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 DDX28Q9NUL7 540 aaKnown RBP12.19□□□□□ -0.46
TUBE1-211ENST00000605457 DUSP13Q9UII6 198 aa12.19□□□□□ -0.46
TUBE1-211ENST00000605457 A0A1W2PPW3 197 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 H3BSA7 217 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 J3QW42 95 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 SSX4O60224 188 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 ADRA2AP08913 450 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 MPV17P39210 176 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 ALDH3B1P43353 468 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 EFNA4P52798 201 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 NUDT6P53370 316 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 MAD2L1BPQ15013 274 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-211ENST00000605457 CLEC12BQ2HXU8 276 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 ZNF718Q3SXZ3 478 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 KLHL12Q53G59 568 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 TMEM255AQ5JRV8 349 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 SLC35D3Q5M8T2 416 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 MBNL2Q5VZF2 373 aaKnown RBP12.18□□□□□ -0.46
TUBE1-211ENST00000605457 DPY19L4Q7Z388 723 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 ZCCHC24Q8N2G6 241 aaKnown RBP12.18□□□□□ -0.46
TUBE1-211ENST00000605457 OR6N2Q8NGY6 317 aa12.18□□□□□ -0.46
TUBE1-211ENST00000605457 KLF14Q8TD94 323 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-211ENST00000605457 IPCEF1Q8WWN9 437 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-211ENST00000605457 TANC2Q9HCD6 1990 aa12.17□□□□□ -0.46
TUBE1-211ENST00000605457 LY6HO94772 140 aa12.17□□□□□ -0.46
TUBE1-211ENST00000605457 F12P00748 615 aaPredicted RBP12.17□□□□□ -0.46
TUBE1-211ENST00000605457 IGHV3-13P01766 116 aa12.17□□□□□ -0.46
TUBE1-211ENST00000605457 ACSM4P0C7M7 580 aa12.17□□□□□ -0.46
TUBE1-211ENST00000605457 OTX1P32242 354 aaPredicted RBP12.17□□□□□ -0.46
TUBE1-211ENST00000605457 RGS6P49758 472 aa12.17□□□□□ -0.46
TUBE1-211ENST00000605457 SELENOVP59797 346 aa12.17□□□□□ -0.46
TUBE1-211ENST00000605457 APOFQ13790 326 aa12.17□□□□□ -0.46
TUBE1-211ENST00000605457 TCEANCQ8N8B7 351 aa12.17□□□□□ -0.46
TUBE1-211ENST00000605457 TMEM163Q8TC26 289 aa12.17□□□□□ -0.46
TUBE1-211ENST00000605457 C9orf16Q9BUW7 83 aa12.17□□□□□ -0.46
TUBE1-211ENST00000605457 RAB1BQ9H0U4 201 aa12.17□□□□□ -0.46
TUBE1-211ENST00000605457 POFUT1Q9H488 388 aa12.17□□□□□ -0.46
TUBE1-211ENST00000605457 DLL4Q9NR61 685 aa12.17□□□□□ -0.46
TUBE1-211ENST00000605457 ORC6Q9Y5N6 252 aa12.17□□□□□ -0.46
TUBE1-211ENST00000605457 ABCA1O95477 2261 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 CCDC182A6NF36 153 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 TRIM64A6NGJ6 449 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 TRIM64BA6NI03 449 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 TLX2O43763 284 aaPredicted RBP12.16□□□□□ -0.46
TUBE1-211ENST00000605457 SELENOFO60613 162 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 TUBG1P23258 451 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 GCH1P30793 250 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 RAD23AP54725 363 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 RPS7P62081 194 aaKnown RBP12.16□□□□□ -0.46
TUBE1-211ENST00000605457 NKPD1Q17RQ9 610 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 COLCA1Q6ZS62 124 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 LURAP1LQ8IV03 231 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 ZNF525Q8N782 197 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 APOBEC3DQ96AK3 386 aaPredicted RBP12.16□□□□□ -0.46
TUBE1-211ENST00000605457 SLAMF6Q96DU3 332 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 COG8Q96MW5 612 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 TPK1Q9H3S4 243 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 MS4A5Q9H3V2 200 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 TUBG2Q9NRH3 451 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 SLCO1C1Q9NYB5 712 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 TAAR3PQ9P1P4 343 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 STARD10Q9Y365 291 aa12.16□□□□□ -0.46
TUBE1-211ENST00000605457 ZNF878C9JN71 531 aa12.15□□□□□ -0.46
TUBE1-211ENST00000605457 E9PQ18 207 aa12.15□□□□□ -0.46
TUBE1-211ENST00000605457 F5H5K5 113 aa12.15□□□□□ -0.46
TUBE1-211ENST00000605457 M0R135 149 aa12.15□□□□□ -0.46
TUBE1-211ENST00000605457 BAG2O95816 211 aa12.15□□□□□ -0.46
TUBE1-211ENST00000605457 NAT2P11245 290 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms