RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 C1orf159Q96HA4 380 aa20.25■□□□□ 0.83
SSX2IP-209ENST00000603677 CADM1Q9BY67 442 aaKnown RBP20.25■□□□□ 0.83
SSX2IP-209ENST00000603677 CMC2Q9NRP2 79 aa20.25■□□□□ 0.83
SSX2IP-209ENST00000603677 LPAR3Q9UBY5 353 aa20.25■□□□□ 0.83
SSX2IP-209ENST00000603677 CDC42EP3Q9UKI2 254 aa20.25■□□□□ 0.83
SSX2IP-209ENST00000603677 IGHV4-61A0A0C4DH41 118 aa20.24■□□□□ 0.83
SSX2IP-209ENST00000603677 RIIAD1A6NNX1 92 aa20.24■□□□□ 0.83
SSX2IP-209ENST00000603677 LILRA1O75019 489 aa20.24■□□□□ 0.83
SSX2IP-209ENST00000603677 ZNF3P17036 446 aa20.24■□□□□ 0.83
SSX2IP-209ENST00000603677 PPP1R8Q12972 351 aaKnown RBP20.24■□□□□ 0.83
SSX2IP-209ENST00000603677 KRTAP27-1Q3LI81 207 aa20.24■□□□□ 0.83
SSX2IP-209ENST00000603677 TEX30Q5JUR7 227 aa20.24■□□□□ 0.83
SSX2IP-209ENST00000603677 COLCA1Q6ZS62 124 aa20.24■□□□□ 0.83
SSX2IP-209ENST00000603677 SLC37A3Q8NCC5 494 aa20.24■□□□□ 0.83
SSX2IP-209ENST00000603677 PROKR2Q8NFJ6 384 aa20.24■□□□□ 0.83
SSX2IP-209ENST00000603677 ELMOD3Q96FG2 381 aa20.24■□□□□ 0.83
SSX2IP-209ENST00000603677 NMNAT2Q9BZQ4 307 aa20.24■□□□□ 0.83
SSX2IP-209ENST00000603677 SAP30LQ9HAJ7 183 aa20.24■□□□□ 0.83
SSX2IP-209ENST00000603677 ABCA2Q9BZC7 2435 aa20.24■□□□□ 0.83
SSX2IP-209ENST00000603677 IGHV1-69-2A0A0G2JMI3 117 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 FKBP6O75344 327 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 DEAF1O75398 565 aaPredicted RBP20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 E2F6O75461 281 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 COL8A2P25067 703 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 FMO3P31513 532 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 GRK5P34947 590 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 MPV17P39210 176 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 MAGEB1P43366 347 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 CBX1P83916 185 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 SLC3A1Q07837 685 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 PSG7Q13046 419 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 PCK2Q16822 640 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 FAM166AQ6J272 317 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 FBXW12Q6X9E4 464 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 ATF6BQ99941 703 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 NIPSNAP1Q9BPW8 284 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 TEX12Q9BXU0 123 aa20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 PDP1Q9P0J1 537 aaPredicted RBP20.23■□□□□ 0.83
SSX2IP-209ENST00000603677 TIMM8AO60220 97 aaPredicted RBP20.22■□□□□ 0.83
SSX2IP-209ENST00000603677 RP2O75695 350 aa20.22■□□□□ 0.83
SSX2IP-209ENST00000603677 TNFSF4P23510 183 aa20.22■□□□□ 0.83
SSX2IP-209ENST00000603677 CCL8P80075 99 aa20.22■□□□□ 0.83
SSX2IP-209ENST00000603677 CDK5R2Q13319 367 aa20.22■□□□□ 0.83
SSX2IP-209ENST00000603677 SPATA46Q5T0L3 261 aa20.22■□□□□ 0.83
SSX2IP-209ENST00000603677 SLC27A4Q6P1M0 643 aa20.22■□□□□ 0.83
SSX2IP-209ENST00000603677 RHOUQ7L0Q8 258 aa20.22■□□□□ 0.83
SSX2IP-209ENST00000603677 PITX2Q99697 317 aa20.22■□□□□ 0.83
SSX2IP-209ENST00000603677 C1QTNF5Q9BXJ0 243 aa20.22■□□□□ 0.83
SSX2IP-209ENST00000603677 ZNF275Q9NSD4 429 aaPredicted RBP20.22■□□□□ 0.83
SSX2IP-209ENST00000603677 MRPL22Q9NWU5 206 aaKnown RBP20.22■□□□□ 0.83
SSX2IP-209ENST00000603677 PURGQ9UJV8 347 aaKnown RBP20.22■□□□□ 0.83
SSX2IP-209ENST00000603677 STARD10Q9Y365 291 aa20.22■□□□□ 0.83
SSX2IP-209ENST00000603677 JMJD1CQ15652 2540 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 H3BN98 237 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 SURF4O15260 269 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 NCR1O76036 304 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 IGHV1-46P01743 117 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 HMGN1P05114 100 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 OSMP13725 252 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 SELEP16581 610 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 PCMT1P22061 227 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 PAICSP22234 425 aaKnown RBP20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 MEP1BQ16820 701 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 HFEQ30201 348 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 ALKBH6Q3KRA9 238 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 OR4Q3Q8NH05 313 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 SPTSSAQ969W0 71 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 CMBLQ96DG6 245 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 DDX28Q9NUL7 540 aaKnown RBP20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 KCNS2Q9ULS6 477 aa20.21■□□□□ 0.83
SSX2IP-209ENST00000603677 TPD52L2O43399 206 aaKnown RBP20.2■□□□□ 0.82
SSX2IP-209ENST00000603677 LMX1BO60663 402 aa20.2■□□□□ 0.82
SSX2IP-209ENST00000603677 SOX14O95416 240 aa20.2■□□□□ 0.82
SSX2IP-209ENST00000603677 TPTEP56180 551 aa20.2■□□□□ 0.82
SSX2IP-209ENST00000603677 CRMP1Q14194 572 aa20.2■□□□□ 0.82
SSX2IP-209ENST00000603677 CHRFAM7AQ494W8 412 aa20.2■□□□□ 0.82
SSX2IP-209ENST00000603677 SHQ1Q6PI26 577 aaKnown RBP20.2■□□□□ 0.82
SSX2IP-209ENST00000603677 CYB561A3Q8NBI2 242 aa20.2■□□□□ 0.82
SSX2IP-209ENST00000603677 YIPF5Q969M3 257 aa20.2■□□□□ 0.82
SSX2IP-209ENST00000603677 MSI2Q96DH6 328 aaKnown RBP20.2■□□□□ 0.82
SSX2IP-209ENST00000603677 TIMD4Q96H15 378 aa20.2■□□□□ 0.82
SSX2IP-209ENST00000603677 ARMC1Q9NVT9 282 aa20.2■□□□□ 0.82
SSX2IP-209ENST00000603677 LOC100289279A0A1B0GTE1 492 aa20.19■□□□□ 0.82
SSX2IP-209ENST00000603677 IFNL4K9M1U5 179 aa20.19■□□□□ 0.82
SSX2IP-209ENST00000603677 GPANK1O95872 356 aa20.19■□□□□ 0.82
SSX2IP-209ENST00000603677 SPI1P17947 270 aa20.19■□□□□ 0.82
SSX2IP-209ENST00000603677 TNFRSF1AP19438 455 aa20.19■□□□□ 0.82
SSX2IP-209ENST00000603677 CORO6Q6QEF8 472 aa20.19■□□□□ 0.82
SSX2IP-209ENST00000603677 USP51Q70EK9 711 aa20.19■□□□□ 0.82
SSX2IP-209ENST00000603677 LINC01356Q8N9X3 169 aa20.19■□□□□ 0.82
SSX2IP-209ENST00000603677 RAB1CQ92928 201 aa20.19■□□□□ 0.82
SSX2IP-209ENST00000603677 DUS3LQ96G46 650 aaKnown RBP20.19■□□□□ 0.82
SSX2IP-209ENST00000603677 FN3KQ9H479 309 aa20.19■□□□□ 0.82
SSX2IP-209ENST00000603677 PNRC2Q9NPJ4 139 aaKnown RBP20.19■□□□□ 0.82
SSX2IP-209ENST00000603677 IL19Q9UHD0 177 aa20.19■□□□□ 0.82
SSX2IP-209ENST00000603677 CLDN25C9JDP6 229 aa20.18■□□□□ 0.82
SSX2IP-209ENST00000603677 LYNX1G3V0Z9 82 aa20.18■□□□□ 0.82
SSX2IP-209ENST00000603677 PPIHO43447 177 aaKnown RBP20.18■□□□□ 0.82
SSX2IP-209ENST00000603677 IFNA2P01563 188 aa20.18■□□□□ 0.82
SSX2IP-209ENST00000603677 ACSM4P0C7M7 580 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms