RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 LIPNQ5VXI9 398 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 CMTM4Q8IZR5 234 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 MEIOBQ8N635 442 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 ZPLD1Q8TCW7 415 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 EXTL1Q92935 676 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 HAVCR1Q96D42 359 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 MED30Q96HR3 178 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 ADGRG7Q96K78 797 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 OXGR1Q96P68 337 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 BEX2Q9BXY8 128 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 COMMD4Q9H0A8 199 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 DEFB127Q9H1M4 99 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 OR51J1Q9H342 316 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 TCF7L1Q9HCS4 588 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 KLHL9Q9P2J3 617 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 MRM2Q9UI43 246 aaKnown RBP10.39□□□□□ -0.75
VRK3-223ENST00000601341 LAMP5Q9UJQ1 280 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 AK6Q9Y3D8 172 aaKnown RBP10.39□□□□□ -0.75
VRK3-223ENST00000601341 TRGV5A0A0B4J1U4 118 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 A6NIZ1 184 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 NPIPA5E9PKD4 350 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 H0YC42 278 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 TGM6O95932 706 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 H2AFB2P0C5Z0 115 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 HLA-DOBP13765 273 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 GDNFP39905 211 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 LHX2P50458 406 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 SUCLG1P53597 346 aaKnown RBP10.38□□□□□ -0.75
VRK3-223ENST00000601341 RAP1BP61224 184 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 RAP1AP62834 184 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 PMP22Q01453 160 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 POU3F1Q03052 451 aaPredicted RBP10.38□□□□□ -0.75
VRK3-223ENST00000601341 GSG1Q2KHT4 349 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 Q5BKY6 102 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 MESTQ5EB52 335 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 FAM205BPQ63HN1 556 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 STAC2Q6ZMT1 411 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 SLC35D2Q76EJ3 337 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 UEVLDQ8IX04 471 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 RBMXL3Q8N7X1 1067 aaKnown RBP10.38□□□□□ -0.75
VRK3-223ENST00000601341 OR10D3Q8NH80 312 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 GPR148Q8TDV2 347 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 RGP1Q92546 391 aaPredicted RBP10.38□□□□□ -0.75
VRK3-223ENST00000601341 SLC25A38Q96DW6 304 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 ADAD1Q96M93 576 aaKnown RBP10.38□□□□□ -0.75
VRK3-223ENST00000601341 ZFP3Q96NJ6 502 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 INTS14Q96SY0 518 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 EXO5Q9H790 373 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 PLSCR3Q9NRY6 295 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 B3GAT1Q9P2W7 334 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 FBXL3Q9UKT7 428 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 NPIPA1Q9UND3 350 aa10.38□□□□□ -0.75
VRK3-223ENST00000601341 ANKRD11Q6UB99 2663 aaPredicted RBP10.37□□□□□ -0.75
VRK3-223ENST00000601341 OR4C45A6NMZ5 311 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 ZNF814B7Z6K7 855 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 CXCL13O43927 109 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 PEX14O75381 377 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 CD3GP09693 182 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 IFNGR1P15260 489 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 ZNF708P17019 499 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 ZNF43P17038 809 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 ENPP1P22413 925 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 GIFP27352 417 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 PSMB10P40306 273 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 EIF1AXP47813 144 aaKnown RBP10.37□□□□□ -0.75
VRK3-223ENST00000601341 MECP2P51608 486 aaKnown RBP10.37□□□□□ -0.75
VRK3-223ENST00000601341 ART1P52961 327 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 CLDN15P56746 228 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 CLDN18P56856 261 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 OLFML2AQ68BL7 652 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 RPUSD3Q6P087 351 aaKnown RBP10.37□□□□□ -0.75
VRK3-223ENST00000601341 LUZP2Q86TE4 346 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 GPAT4Q86UL3 456 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 ZNF511Q8NB15 262 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 OR2G2Q8NGZ5 317 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 ZNF519Q8TB69 540 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 FCAMRQ8WWV6 532 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 ZCCHC14Q8WYQ9 949 aaKnown RBP10.37□□□□□ -0.75
VRK3-223ENST00000601341 CPNE4Q96A23 557 aaPredicted RBP10.37□□□□□ -0.75
VRK3-223ENST00000601341 GFI1Q99684 422 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 LIN7BQ9HAP6 207 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 SLC17A5Q9NRA2 495 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 FRRS1LQ9P0K9 344 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 NPTNQ9Y639 398 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 MED12Q93074 2177 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 A0A1B0GUH1 482 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 PRSS37A4D1T9 235 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 ANKRD34BA5PLL1 514 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 K7EM74 188 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 GPR171O14626 319 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 MAGEB4O15481 346 aaPredicted RBP10.37□□□□□ -0.75
VRK3-223ENST00000601341 KRT33AO76009 404 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 IGHG3P01860 377 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 SULT1A3P0DMM9 295 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 SULT1A4P0DMN0 295 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 GNG2P59768 71 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 ROM1Q03395 351 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 SSBP1Q04837 148 aaKnown RBP10.37□□□□□ -0.75
VRK3-223ENST00000601341 FCN2Q15485 313 aa10.37□□□□□ -0.75
VRK3-223ENST00000601341 LAMTOR1Q6IAA8 161 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms