RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 CD74P04233 296 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 H2BFMP0C1H6 154 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 MPGP29372 298 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 DAP3P51398 398 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 HSF1Q00613 529 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 DNM1P34Q6PK57 102 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 C5orf46Q6UWT4 87 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 CDH26Q8IXH8 852 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 FAM46BQ96A09 425 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 ZNF501Q96CX3 271 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 MED9Q9NWA0 146 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 ATXN7L1Q9ULK2 861 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 EXPH5Q8NEV8 1989 aa18.04■□□□□ 0.48
SHKBP1-225ENST00000600733 HOXD4P09016 255 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-225ENST00000600733 NUP62P37198 522 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-225ENST00000600733 SLC22A6Q4U2R8 563 aa18.04■□□□□ 0.48
SHKBP1-225ENST00000600733 TMEM244Q5VVB8 128 aa18.04■□□□□ 0.48
SHKBP1-225ENST00000600733 COX15Q7KZN9 410 aa18.04■□□□□ 0.48
SHKBP1-225ENST00000600733 ZNF584Q8IVC4 421 aa18.04■□□□□ 0.48
SHKBP1-225ENST00000600733 SPERTQ8NA61 448 aa18.04■□□□□ 0.48
SHKBP1-225ENST00000600733 APCDD1LQ8NCL9 501 aa18.04■□□□□ 0.48
SHKBP1-225ENST00000600733 OR1S1Q8NH92 325 aa18.04■□□□□ 0.48
SHKBP1-225ENST00000600733 PFDN2Q9UHV9 154 aa18.04■□□□□ 0.48
SHKBP1-225ENST00000600733 ANKUB1A6NFN9 424 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 AQP8O94778 261 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 GNALP38405 381 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 UBXN2BQ14CS0 331 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 ZNF546Q86UE3 836 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 BEST3Q8N1M1 668 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 GVQW1Q8N7I0 195 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 NKAIN3Q8N8D7 197 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 OR52N4Q8NGI2 321 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 OR6K3Q8NGY3 331 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 MFSD8Q8NHS3 518 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 STT3BQ8TCJ2 826 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 RNF133Q8WVZ7 376 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 C5orf34Q96MH7 638 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 NUDT22Q9BRQ3 303 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 EDEM2Q9BV94 578 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 VSIG4Q9Y279 399 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 SESN1Q9Y6P5 492 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 A0A0A6YYH2 397 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 A6NJ64 397 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 RAB27BO00194 218 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 CCSO14618 274 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 NUDT21O43809 227 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 UBCP0CG48 685 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 ZP4Q12836 540 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 FOXF1Q12946 379 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 ZNF813Q6ZN06 617 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 FJX1Q86VR8 437 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 PAQR4Q8N4S7 273 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 PLPP5Q8NEB5 264 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 OR5M9Q8NGP3 310 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 ST8SIA1Q92185 356 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 AQP3Q92482 292 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 FOXQ1Q9C009 403 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 PPA2Q9H2U2 334 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 PTGES2Q9H7Z7 377 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 CHST11Q9NPF2 352 aa18.03■□□□□ 0.48
SHKBP1-225ENST00000600733 HLA-AP01891 365 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-225ENST00000600733 TTRP02766 147 aa18.02■□□□□ 0.48
SHKBP1-225ENST00000600733 C17orf67Q0P5P2 114 aa18.02■□□□□ 0.48
SHKBP1-225ENST00000600733 UNC119Q13432 240 aa18.02■□□□□ 0.48
SHKBP1-225ENST00000600733 CDNFQ49AH0 187 aa18.02■□□□□ 0.48
SHKBP1-225ENST00000600733 OR52W1Q6IF63 320 aa18.02■□□□□ 0.48
SHKBP1-225ENST00000600733 MISPQ8IVT2 679 aa18.02■□□□□ 0.48
SHKBP1-225ENST00000600733 RELL2Q8NC24 303 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-225ENST00000600733 C11orf40Q8WZ69 217 aa18.02■□□□□ 0.48
SHKBP1-225ENST00000600733 ADAT3Q96EY9 351 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-225ENST00000600733 FAM206AQ9NX38 181 aa18.02■□□□□ 0.48
SHKBP1-225ENST00000600733 ASCC3Q8N3C0 2202 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-225ENST00000600733 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 A8MXK9 166 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 BDKRB2P30411 391 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 MMP16P51512 607 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 BIDP55957 195 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 ZNF260Q3ZCT1 412 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 LRRC37A5PQ49AS3 106 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 C3orf33Q6P1S2 294 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 TRAPPC6BQ86SZ2 158 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 RTN4RL2Q86UN3 420 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 SLC51BQ86UW2 128 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 CHST4Q8NCG5 386 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 OR5M8Q8NGP6 311 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 NUDCD2Q8WVJ2 157 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 ASB13Q8WXK3 278 aa18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 NOP16Q9Y3C1 178 aaKnown RBP18.02■□□□□ 0.47
SHKBP1-225ENST00000600733 OR14I1A6ND48 311 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 OR5H14A6NHG9 310 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 NAGAP17050 411 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 CD34P28906 385 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 CXADRP78310 365 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 CLVS2Q5SYC1 327 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 TMEM81Q6P7N7 255 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 DEGS2Q6QHC5 323 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 PDZD9Q8IXQ8 264 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 PTX4Q96A99 478 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 MRGPRFQ96AM1 343 aa18.01■□□□□ 0.47
SHKBP1-225ENST00000600733 SLAMF6Q96DU3 332 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms