RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 ICMTO60725 284 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 GOSR1O95249 250 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 ABHD16AO95870 558 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 DBHP09172 617 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 LIMS3P0CW19 117 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 LIMS4P0CW20 117 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 CCL2P13500 99 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 CALCRP30988 508 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 APLNRP35414 380 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 GDI2P50395 445 aaKnown RBP10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 NR1H2P55055 460 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 MVKQ03426 396 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 HGFACQ04756 655 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 SPOCK1Q08629 439 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 ST3GAL4Q11206 333 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 KCTD18Q6PI47 426 aaPredicted RBP10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 LRRN1Q6UXK5 716 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 AHSA2Q719I0 299 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 SPATC1Q76KD6 591 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 EGFL6Q8IUX8 553 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 ZNF679Q8IYX0 411 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 PIP4P2Q8N4L2 257 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 ZNF540Q8NDQ6 660 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 OR1J2Q8NGS2 313 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 IPCEF1Q8WWN9 437 aaPredicted RBP10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 SGCDQ92629 289 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 TMEM80Q96HE8 168 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 HS3ST6Q96QI5 342 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 DCLRE1CQ96SD1 692 aaKnown RBP10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 KCNJ15Q99712 375 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 YTHDF1Q9BYJ9 559 aaKnown RBP10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 ESRP2Q9H6T0 727 aaKnown RBP10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 ERVK13-1Q9NX77 482 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 SCN3BQ9NY72 215 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 PLEKHB1Q9UF11 243 aaPredicted RBP10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 MRM2Q9UI43 246 aaKnown RBP10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 LRCH1Q9Y2L9 728 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 TPRKBQ9Y3C4 175 aa10.95□□□□□ -0.66
CHMP2A-206ENST00000600118 C5orf49A4QMS7 147 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 TRIM64A6NGJ6 449 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 A6NNC1 897 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 ZNF254O75437 659 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 SULT1C4O75897 302 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 CDK1P06493 297 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 COX6B1P14854 86 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 C21orf33P30042 268 aaPredicted RBP10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 DCTDP32321 178 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 WNT5AP41221 380 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 GRB2P62993 217 aaKnown RBP10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 GALEQ14376 348 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 TBC1D28Q2M2D7 210 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 CDONQ4KMG0 1287 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 RNLSQ5VYX0 342 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 COLCA1Q6ZS62 124 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 COPS4Q9BT78 406 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 MROQ9BYG7 248 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 NIPAL2Q9H841 368 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 ELOVL3Q9HB03 270 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 CDH20Q9HBT6 801 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 BLOC1S6Q9UL45 172 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 LRP12Q9Y561 859 aa10.94□□□□□ -0.66
CHMP2A-206ENST00000600118 METTL15A6NJ78 407 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 SHISA9B4DS77 424 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 PTGES3LE9PB15 166 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 ATP6V1G2-DDX39BF2Z307 99 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 F5H5K5 113 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 M0R135 149 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 PSMD9O00233 223 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 ABCD4O14678 606 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 MAGEB4O15481 346 aaPredicted RBP10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 SRSF10O75494 262 aaKnown RBP10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 CRYAAP02489 173 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 CD3EP07766 207 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 H2BFMP0C1H6 154 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 ACSM4P0C7M7 580 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 COL8A1P27658 744 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 PCSK6P29122 969 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 ETV1P50549 477 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 NKX6-1P78426 367 aaPredicted RBP10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 PLEKHG7Q6ZR37 379 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 PRSS45Q7RTY3 260 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 KCTD20Q7Z5Y7 419 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 KRT77Q7Z794 578 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 LHFPL3Q86UP9 236 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 SYS1Q8N2H4 156 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 STX19Q8N4C7 294 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 MYDGFQ969H8 173 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 SPTSSAQ969W0 71 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 RNF166Q96A37 237 aaPredicted RBP10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 PIK3IP1Q96FE7 263 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 ZNF799Q96GE5 643 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 RADILQ96JH8 1075 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 C4orf45Q96LM5 186 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 ALG8Q9BVK2 526 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 C1QTNF5Q9BXJ0 243 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 CDCA4Q9BXL8 241 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 TTTY10Q9BZA0 68 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 ERVK-18Q9QC07 812 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 CLEC2DQ9UHP7 191 aa10.93□□□□□ -0.66
CHMP2A-206ENST00000600118 EXOSC1Q9Y3B2 195 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms