RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 PLEK2Q9NYT0 353 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 KLHDC2Q9Y2U9 406 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 HEATR1Q9H583 2144 aaKnown RBP16.3■□□□□ 0.2
CCDC9-205ENST00000600117 LOC100509620A0A075B734 347 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 IQCMA0A1B0GVH7 501 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 A0A1W2PPR1 153 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 ABCD4O14678 606 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 TMCC2O75069 709 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 PLAUP00749 431 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 ZNF35P13682 527 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 ALOX5APP20292 161 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 HCCSP53701 268 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 CDK5R2Q13319 367 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 EIF2B1Q14232 305 aaKnown RBP16.3■□□□□ 0.2
CCDC9-205ENST00000600117 ELFN2Q5R3F8 820 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 TMEM154Q6P9G4 183 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 THAP5Q7Z6K1 395 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 ALDH16A1Q8IZ83 802 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 SLC30A7Q8NEW0 376 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 OR51G2Q8NGK0 314 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 OR1F12Q8NHA8 337 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 ZNF184Q99676 751 aaPredicted RBP16.3■□□□□ 0.2
CCDC9-205ENST00000600117 ABHD6Q9BV23 337 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 HDHD2Q9H0R4 259 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 ATPIF1Q9UII2 106 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 RAB26Q9ULW5 256 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 COPS3Q9UNS2 423 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 RNF115Q9Y4L5 304 aa16.3■□□□□ 0.2
CCDC9-205ENST00000600117 HIVEP2P31629 2446 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 SHISA9B4DS77 424 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 APOL3O95236 402 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 PTHP01270 115 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 CD3EP07766 207 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 INHBBP09529 407 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 DBTP11182 482 aaKnown RBP16.29■□□□□ 0.2
CCDC9-205ENST00000600117 CCL2P13500 99 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 MYF6P23409 242 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 STOMP27105 288 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 HTR5AP47898 357 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 MTNR1AP48039 350 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 POU4F2Q12837 409 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 RSPO1Q2MKA7 263 aaPredicted RBP16.29■□□□□ 0.2
CCDC9-205ENST00000600117 KRTAP27-1Q3LI81 207 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 ADAM5Q6NVV9 412 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 CLEC9AQ6UXN8 241 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 PRIMA1Q86XR5 153 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 PAQR4Q8N4S7 273 aaPredicted RBP16.29■□□□□ 0.2
CCDC9-205ENST00000600117 ZNF454Q8N9F8 522 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 WFDC11Q8NEX6 87 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 IL17RDQ8NFM7 739 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 OR4F15Q8NGB8 312 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 SPATA3Q8NHX4 192 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 SLAMF6Q96DU3 332 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 RNFT2Q96EX2 444 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 COQ7Q99807 217 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 AMBNQ9NP70 447 aa16.29■□□□□ 0.2
CCDC9-205ENST00000600117 DDX28Q9NUL7 540 aaKnown RBP16.29■□□□□ 0.2
CCDC9-205ENST00000600117 KIAA1324LA8MWY0 1029 aaPredicted RBP16.28■□□□□ 0.2
CCDC9-205ENST00000600117 ATP6V1G2-DDX39BF2Z307 99 aa16.28■□□□□ 0.2
CCDC9-205ENST00000600117 J3QRE1 110 aa16.28■□□□□ 0.2
CCDC9-205ENST00000600117 CRYAAP02489 173 aa16.28■□□□□ 0.2
CCDC9-205ENST00000600117 HEXAP06865 529 aa16.28■□□□□ 0.2
CCDC9-205ENST00000600117 APLNRP35414 380 aa16.28■□□□□ 0.2
CCDC9-205ENST00000600117 HGFACQ04756 655 aa16.28■□□□□ 0.2
CCDC9-205ENST00000600117 PAMR1Q6UXH9 720 aa16.28■□□□□ 0.2
CCDC9-205ENST00000600117 SLC35F2Q8IXU6 374 aa16.28■□□□□ 0.2
CCDC9-205ENST00000600117 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
CCDC9-205ENST00000600117 RFLNBQ8N5W9 214 aa16.28■□□□□ 0.2
CCDC9-205ENST00000600117 KBTBD8Q8NFY9 601 aa16.28■□□□□ 0.2
CCDC9-205ENST00000600117 LILRB1Q8NHL6 650 aaPredicted RBP16.28■□□□□ 0.2
CCDC9-205ENST00000600117 RNF133Q8WVZ7 376 aa16.28■□□□□ 0.2
CCDC9-205ENST00000600117 SLC7A6Q92536 515 aa16.28■□□□□ 0.2
CCDC9-205ENST00000600117 LGALS12Q96DT0 336 aa16.28■□□□□ 0.2
CCDC9-205ENST00000600117 MRPS18AQ9NVS2 196 aaKnown RBP16.28■□□□□ 0.2
CCDC9-205ENST00000600117 EXOGQ9Y2C4 368 aaKnown RBP16.28■□□□□ 0.2
CCDC9-205ENST00000600117 SNTNA6NMZ2 147 aa16.27■□□□□ 0.2
CCDC9-205ENST00000600117 PRR32B1ATL7 298 aa16.27■□□□□ 0.2
CCDC9-205ENST00000600117 LYNP07948 512 aa16.27■□□□□ 0.2
CCDC9-205ENST00000600117 DBHP09172 617 aa16.27■□□□□ 0.2
CCDC9-205ENST00000600117 SLC15A1P46059 708 aa16.27■□□□□ 0.2
CCDC9-205ENST00000600117 GDI2P50395 445 aaKnown RBP16.27■□□□□ 0.2
CCDC9-205ENST00000600117 TBC1D28Q2M2D7 210 aa16.27■□□□□ 0.2
CCDC9-205ENST00000600117 ZNF704Q6ZNC4 412 aaPredicted RBP16.27■□□□□ 0.2
CCDC9-205ENST00000600117 OR1J2Q8NGS2 313 aa16.27■□□□□ 0.2
CCDC9-205ENST00000600117 THEM6Q8WUY1 208 aa16.27■□□□□ 0.2
CCDC9-205ENST00000600117 MNTQ99583 582 aa16.27■□□□□ 0.2
CCDC9-205ENST00000600117 ATF6BQ99941 703 aa16.27■□□□□ 0.2
CCDC9-205ENST00000600117 CDH20Q9HBT6 801 aa16.27■□□□□ 0.2
CCDC9-205ENST00000600117 LAMP5Q9UJQ1 280 aa16.27■□□□□ 0.2
CCDC9-205ENST00000600117 RPL36Q9Y3U8 105 aaKnown RBP16.27■□□□□ 0.2
CCDC9-205ENST00000600117 C5orf49A4QMS7 147 aa16.26■□□□□ 0.19
CCDC9-205ENST00000600117 ZNF878C9JN71 531 aa16.26■□□□□ 0.19
CCDC9-205ENST00000600117 RAF1P04049 648 aa16.26■□□□□ 0.19
CCDC9-205ENST00000600117 OTX1P32242 354 aaPredicted RBP16.26■□□□□ 0.19
CCDC9-205ENST00000600117 WNT5AP41221 380 aa16.26■□□□□ 0.19
CCDC9-205ENST00000600117 NKX6-1P78426 367 aaPredicted RBP16.26■□□□□ 0.19
CCDC9-205ENST00000600117 ECH1Q13011 328 aa16.26■□□□□ 0.19
CCDC9-205ENST00000600117 DEFB113Q30KQ7 82 aa16.26■□□□□ 0.19
CCDC9-205ENST00000600117 SLC22A25Q6T423 547 aa16.26■□□□□ 0.19
CCDC9-205ENST00000600117 NEUROG1Q92886 237 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms