RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	SGCD	Q92629	289 aa		19.07	■□□□□ 0.64
LTBP4-227	ENST00000600026	MAP6	Q96JE9	813 aa		19.07	■□□□□ 0.64
LTBP4-227	ENST00000600026	HDHD2	Q9H0R4	259 aa		19.07	■□□□□ 0.64
LTBP4-227	ENST00000600026	WNT5B	Q9H1J7	359 aa		19.07	■□□□□ 0.64
LTBP4-227	ENST00000600026	ESRP2	Q9H6T0	727 aa	Known RBP	19.07	■□□□□ 0.64
LTBP4-227	ENST00000600026	ZNF696	Q9H7X3	374 aa		19.07	■□□□□ 0.64
LTBP4-227	ENST00000600026	CENPM	Q9NSP4	180 aa		19.07	■□□□□ 0.64
LTBP4-227	ENST00000600026	TEP1	Q99973	2627 aa	Known RBP	19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	IQCM	A0A1B0GVH7	501 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	ZNF878	C9JN71	531 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	DOK2	O60496	412 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	CTAG2	O75638	210 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	PTH	P01270	115 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	IGKV3-15	P01624	115 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	IGLV1-44	P01699	117 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	MT-ND2	P03891	347 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	SSTR2	P30874	369 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	IDH3G	P51553	393 aa	Predicted RBP	19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	ACTA2	P62736	377 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	ACTG2	P63267	376 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	MVK	Q03426	396 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	EGR3	Q06889	387 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	BSPH1	Q075Z2	132 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	ECH1	Q13011	328 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	CCDC92	Q53HC0	331 aa	Predicted RBP	19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	RNLS	Q5VYX0	342 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	ZNF774	Q6NX45	483 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	TMPRSS11A	Q6ZMR5	421 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	RHOU	Q7L0Q8	258 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	MYPOP	Q86VE0	399 aa	Predicted RBP	19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	KLHL36	Q8N4N3	616 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	FAM169B	Q8N8A8	192 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	RNF133	Q8WVZ7	376 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	ZNF75A	Q96N20	296 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	ALG8	Q9BVK2	526 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	CDCA4	Q9BXL8	241 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	MRO	Q9BYG7	248 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	TTTY10	Q9BZA0	68 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	IKZF2	Q9UKS7	526 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	ERGIC3	Q9Y282	383 aa		19.06	■□□□□ 0.64
LTBP4-227	ENST00000600026	MYL12B	O14950	172 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	KRT8	P05787	483 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	CELA3B	P08861	270 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	H2BFM	P0C1H6	154 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	LIMS3	P0CW19	117 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	LIMS4	P0CW20	117 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	PRF1	P14222	555 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	CD40	P25942	277 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	ETV1	P50549	477 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	ZNF773	Q6PK81	442 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	DEGS2	Q6QHC5	323 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	TMEM108	Q6UXF1	575 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	SPATC1	Q76KD6	591 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	VASH1	Q7L8A9	365 aa	Predicted RBP	19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	FAM220A	Q7Z4H9	259 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	KCTD20	Q7Z5Y7	419 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	TMEM200A	Q86VY9	491 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	SVOP	Q8N4V2	548 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	RFLNB	Q8N5W9	214 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	OR1F12	Q8NHA8	337 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	AKR7L	Q8NHP1	331 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	OR8B4	Q96RC9	309 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	SIGLEC11	Q96RL6	698 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	AMELY	Q99218	206 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	ATPIF1	Q9UII2	106 aa		19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026	CAB39	Q9Y376	341 aa	Predicted RBP	19.05	■□□□□ 0.64
LTBP4-227	ENST00000600026		A0A087WXM4	84 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	MAGEA13P	A6NCF6	341 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	TRIM64	A6NGJ6	449 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	METTL15	A6NJ78	407 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	ZNF254	O75437	659 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	CD3E	P07766	207 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	ADRA2A	P08913	450 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	TACSTD2	P09758	323 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	CECR9	P0C854	216 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	COX5B	P10606	129 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	PTAFR	P25105	342 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	HTR5A	P47898	357 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	CDH15	P55291	814 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	GRB2	P62993	217 aa	Known RBP	19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	ROM1	Q03395	351 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	SPOCK1	Q08629	439 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	RAB39A	Q14964	217 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	C3orf36	Q3SXR2	165 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	CDON	Q4KMG0	1287 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	SSX6	Q7RTT6	188 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	EGFL6	Q8IUX8	553 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	ZNF679	Q8IYX0	411 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	TSPAN14	Q8NG11	270 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	OR10S1	Q8NGN2	331 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	COQ7	Q99807	217 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	ATF6B	Q99941	703 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	SLCO1C1	Q9NYB5	712 aa		19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026	HEATR1	Q9H583	2144 aa	Known RBP	19.04	■□□□□ 0.64
LTBP4-227	ENST00000600026		A0A1W2PPR1	153 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	TMEM129	A0AVI4	362 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	ABCD4	O14678	606 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	SYNGR3	O43761	229 aa		19.03	■□□□□ 0.64
LTBP4-227	ENST00000600026	SULT1C4	O75897	302 aa		19.03	■□□□□ 0.64

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms