RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 SNTB1Q13884 538 aaKnown RBP10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 GALEQ14376 348 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 PCK2Q16822 640 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 TBRG1Q3YBR2 411 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 HIKESHIQ53FT3 197 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 SFRP5Q5T4F7 317 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 TMEM53Q6P2H8 277 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 TMEM154Q6P9G4 183 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 KCTD18Q6PI47 426 aaPredicted RBP10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 CORO6Q6QEF8 472 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 TMPRSS11AQ6ZMR5 421 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 DCXRQ7Z4W1 244 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 SYT9Q86SS6 491 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 LIX1LQ8IVB5 337 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 SKA3Q8IX90 412 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 CCDC36Q8IYA8 594 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 KLHL36Q8N4N3 616 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 GJC3Q8NFK1 279 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 OR52N5Q8NH56 324 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 SMAP2Q8WU79 429 aaPredicted RBP10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 SNX33Q8WV41 574 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 SGCDQ92629 289 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 BCL2L2Q92843 193 aaPredicted RBP10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 WACQ9BTA9 647 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 ALG8Q9BVK2 526 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 MND1Q9BWT6 205 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 CDCA4Q9BXL8 241 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 TTTY10Q9BZA0 68 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 RNF121Q9H920 327 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 ERVK13-1Q9NX77 482 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 JKAMPQ9P055 326 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 CYB5R1Q9UHQ9 305 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 IKZF2Q9UKS7 526 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 LHFPL6Q9Y693 200 aa10.51□□□□□ -0.73
SHKBP1-213ENST00000597325 TRIM64A6NGJ6 449 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 KRT8P05787 483 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 PSKH1P11801 424 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 HOXB1P14653 301 aaPredicted RBP10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 ATP6V1B1P15313 513 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 ALOX5APP20292 161 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 PSMB1P20618 241 aaKnown RBP10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 C21orf33P30042 268 aaPredicted RBP10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 ARR3P36575 388 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 CD79BP40259 229 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 KIR2DL3P43628 341 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 ETV1P50549 477 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 HCCSP53701 268 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 MVKQ03426 396 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 EGR3Q06889 387 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 RAB35Q15286 201 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 TAF13Q15543 124 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 TBCEQ15813 527 aaPredicted RBP10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 GABRA6Q16445 453 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 Q5PR19 223 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 ZNF322Q6U7Q0 402 aaPredicted RBP10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 STAC2Q6ZMT1 411 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 PLEKHG7Q6ZR37 379 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 KRT77Q7Z794 578 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 LHFPL3Q86UP9 236 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 STEAP2Q8NFT2 490 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 FBXO17Q96EF6 278 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 USB1Q9BQ65 265 aaKnown RBP10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 ABHD6Q9BV23 337 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 MRPS26Q9BYN8 205 aaKnown RBP10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 OBP2BQ9NPH6 170 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 PLEK2Q9NYT0 353 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 SCOCQ9UIL1 159 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 COPS3Q9UNS2 423 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 KLHDC2Q9Y2U9 406 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 AMDHD2Q9Y303 409 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 TIMM10BQ9Y5J6 103 aa10.5□□□□□ -0.73
SHKBP1-213ENST00000597325 TRRAPQ9Y4A5 3859 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 ARPC4-TTLL3A0A0A6YYG9 625 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 TMEM129A0AVI4 362 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 ZNF878C9JN71 531 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 RER1O15258 196 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 SGCEO43556 437 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 DOK2O60496 412 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 WNT11O96014 354 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 HLA-HP01893 362 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 MT-ND5P03915 603 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 HTR1AP08908 422 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 H2BFMP0C1H6 154 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 ZNF32P17041 273 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 ZNF85Q03923 595 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 PLP2Q04941 152 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 KRTAP1-1Q07627 177 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 TSC22D1Q15714 1073 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 GSG1Q2KHT4 349 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 ELFN2Q5R3F8 820 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 RNLSQ5VYX0 342 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 CFAP77Q6ZQR2 320 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 SPATC1Q76KD6 591 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 SPARTQ8N0X7 666 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 RFLNBQ8N5W9 214 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 OR52N1Q8NH53 320 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 ST7LQ8TDW4 575 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 FCGR1BQ92637 280 aa10.49□□□□□ -0.73
SHKBP1-213ENST00000597325 SLAMF6Q96DU3 332 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms