RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 FAIMQ9NVQ4 179 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 AASSQ9UDR5 926 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 LAMP5Q9UJQ1 280 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 EDARQ9UNE0 448 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 HSPE1-MOB4S4R3N1 261 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 ICMTO60725 284 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 SMPD2O60906 423 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 DBHP09172 617 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 FAM157BP0CG42 384 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 APOBEC3AP31941 199 aaPredicted RBP12.39□□□□□ -0.43
VRK3-213ENST00000597215 GLRXP35754 106 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 ATP6V1E1P36543 226 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 WNT5AP41221 380 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 SLC15A1P46059 708 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 RGS6P49758 472 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 FABP6P51161 128 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 UCP2P55851 309 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 GRB2P62993 217 aaKnown RBP12.39□□□□□ -0.43
VRK3-213ENST00000597215 KRTAP27-1Q3LI81 207 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 C6orf52Q5T4I8 152 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 PAMR1Q6UXH9 720 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 RHOUQ7L0Q8 258 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 SLC35F2Q8IXU6 374 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 C1orf174Q8IYL3 243 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 FBXL14Q8N1E6 418 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 SMAP2Q8WU79 429 aaPredicted RBP12.39□□□□□ -0.43
VRK3-213ENST00000597215 RNF133Q8WVZ7 376 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 APH1BQ8WW43 257 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 SLC7A6Q92536 515 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 SPTSSAQ969W0 71 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 C4orf45Q96LM5 186 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 OR51B6Q9H340 312 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 GRIP1Q9Y3R0 1128 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 ABCA12Q86UK0 2595 aa12.39□□□□□ -0.43
VRK3-213ENST00000597215 AKAP6Q13023 2319 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 ZNF670-ZNF695F2Z2N8 137 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 F5H5K5 113 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 J3QW42 95 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 M0R135 149 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 PHYHO14832 338 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 GPRIN2O60269 458 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 LCKP06239 509 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 GNAO1P09471 354 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 ALOX5APP20292 161 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 THBS4P35443 961 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 TPTEP56180 551 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 ISL1P61371 349 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 ZNF91Q05481 1191 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 KCTD18Q6PI47 426 aaPredicted RBP12.38□□□□□ -0.43
VRK3-213ENST00000597215 USP51Q70EK9 711 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 SPATC1Q76KD6 591 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 MUC15Q8N387 334 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 ABHD4Q8TB40 342 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 TMEM171Q8WVE6 324 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 ASB17Q8WXJ9 295 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 NRGNQ92686 78 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 RNFT2Q96EX2 444 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 ZNF799Q96GE5 643 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 AMELYQ99218 206 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 KCNJ15Q99712 375 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 TBCCD1Q9NVR7 557 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 KLHDC2Q9Y2U9 406 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 RPL36Q9Y3U8 105 aaKnown RBP12.38□□□□□ -0.43
VRK3-213ENST00000597215 CMAHPQ9Y471 501 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 DSCAMO60469 2012 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 APCP25054 2843 aa12.38□□□□□ -0.43
VRK3-213ENST00000597215 WBP4O75554 376 aaKnown RBP12.37□□□□□ -0.43
VRK3-213ENST00000597215 APOL3O95236 402 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 APOC1P02654 83 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 RAF1P04049 648 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 H2BFMP0C1H6 154 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 OR4A8P0C604 315 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 ACSM4P0C7M7 580 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 OR2T7P0C7T2 308 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 DBTP11182 482 aaKnown RBP12.37□□□□□ -0.43
VRK3-213ENST00000597215 HSD11B1P28845 292 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 OTX1P32242 354 aaPredicted RBP12.37□□□□□ -0.43
VRK3-213ENST00000597215 TTKP33981 857 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 OPRL1P41146 370 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 HCCSP53701 268 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 PPP1CBP62140 327 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 ADIPOQQ15848 244 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 RSPO1Q2MKA7 263 aaPredicted RBP12.37□□□□□ -0.43
VRK3-213ENST00000597215 AGAP6Q5VW22 663 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 RGS7BPQ6MZT1 257 aaPredicted RBP12.37□□□□□ -0.43
VRK3-213ENST00000597215 DRAM2Q6UX65 266 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 RFPL4BQ6ZWI9 263 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 THAP5Q7Z6K1 395 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 KRT77Q7Z794 578 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 DTX2Q86UW9 622 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 ZNF101Q8IZC7 436 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 OR1J1Q8NGS3 322 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 OR2T27Q8NH04 317 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 CNIH3Q8TBE1 160 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 COG8Q96MW5 612 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 CCL19Q99731 98 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 RASSF4Q9H2L5 321 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 LIME1Q9H400 295 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 ST6GALNAC2Q9UJ37 374 aa12.37□□□□□ -0.43
VRK3-213ENST00000597215 COPS3Q9UNS2 423 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms