RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 CD5LO43866 347 aa17.99■□□□□ 0.47
PNKP-209ENST00000596726 NCR1O76036 304 aa17.99■□□□□ 0.47
PNKP-209ENST00000596726 LYNX1P0DP58 116 aa17.99■□□□□ 0.47
PNKP-209ENST00000596726 ZNF823P16415 610 aa17.99■□□□□ 0.47
PNKP-209ENST00000596726 SPI1P17947 270 aa17.99■□□□□ 0.47
PNKP-209ENST00000596726 MAGEB1P43366 347 aa17.99■□□□□ 0.47
PNKP-209ENST00000596726 CDK5Q00535 292 aa17.99■□□□□ 0.47
PNKP-209ENST00000596726 TMEM249Q2WGJ8 235 aa17.99■□□□□ 0.47
PNKP-209ENST00000596726 SLC27A4Q6P1M0 643 aa17.99■□□□□ 0.47
PNKP-209ENST00000596726 ZNF540Q8NDQ6 660 aa17.99■□□□□ 0.47
PNKP-209ENST00000596726 OR51L1Q8NGJ5 315 aa17.99■□□□□ 0.47
PNKP-209ENST00000596726 GTF3AQ92664 365 aaKnown RBP17.99■□□□□ 0.47
PNKP-209ENST00000596726 BPESC1Q9GZL8 116 aa17.99■□□□□ 0.47
PNKP-209ENST00000596726 TVP23AA6NH52 213 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 RIIAD1A6NNX1 92 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 MT-ND5P03915 603 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 GYPBP06028 91 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 CLUP10909 449 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 PSKH1P11801 424 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 ZNF3P17036 446 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 COL8A2P25067 703 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 RGS6P49758 472 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 MRPS11P82912 194 aaKnown RBP17.98■□□□□ 0.47
PNKP-209ENST00000596726 PSG7Q13046 419 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 GINS1Q14691 196 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 ATP6AP1Q15904 470 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 PCK2Q16822 640 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 PCGF3Q3KNV8 242 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 FAHD1Q6P587 224 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 TMEM154Q6P9G4 183 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 LYPD4Q6UWN0 246 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 ATG16L2Q8NAA4 619 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 OR2AJ1Q8NGZ0 328 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 OR5K1Q8NHB7 308 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 RDH5Q92781 318 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 MAP6Q96JE9 813 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 COG8Q96MW5 612 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 AP4S1Q9Y587 144 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 COMMD3-BMI1R4GMX3 469 aa17.98■□□□□ 0.47
PNKP-209ENST00000596726 IGHV4-61A0A0C4DH41 118 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 POU1F1P28069 291 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 FMO3P31513 532 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 LIPAP38571 399 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 RPS27P42677 84 aaKnown RBP17.97■□□□□ 0.47
PNKP-209ENST00000596726 ECH1Q13011 328 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 TEX30Q5JUR7 227 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 LINC01590Q5TEZ4 76 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 OR10S1Q8NGN2 331 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 DNAJC9Q8WXX5 260 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 PTP4A1Q93096 173 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 YIPF5Q969M3 257 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 PITX2Q99697 317 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 ATF6BQ99941 703 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 HCAR1Q9BXC0 346 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 WDR76Q9H967 626 aa17.97■□□□□ 0.47
PNKP-209ENST00000596726 CGGBP1Q9UFW8 167 aaPredicted RBP17.97■□□□□ 0.47
PNKP-209ENST00000596726 ADH4P08319 380 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 TACSTD2P09758 323 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 KITLGP21583 273 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 ACHEP22303 614 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 DAPP51397 102 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 ZNF81P51508 661 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 BLVRAP53004 296 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 GGTLC2Q14390 218 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 COLCA1Q6ZS62 124 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 CCDC121Q6ZUS5 278 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 ZNF511Q8NB15 262 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 APOBEC3DQ96AK3 386 aaPredicted RBP17.96■□□□□ 0.47
PNKP-209ENST00000596726 HAVCR1Q96D42 359 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 MED20Q9H944 212 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 CHODLQ9H9P2 273 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 SLC25A19Q9HC21 320 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 CYSLTR2Q9NS75 346 aa17.96■□□□□ 0.47
PNKP-209ENST00000596726 PURGQ9UJV8 347 aaKnown RBP17.96■□□□□ 0.47
PNKP-209ENST00000596726 ZSCAN5BA6NJL1 495 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 FAM183AA6NL82 134 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 SURF4O15260 269 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 TLX2O43763 284 aaPredicted RBP17.95■□□□□ 0.46
PNKP-209ENST00000596726 LILRA1O75019 489 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 RP2O75695 350 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 CIB2O75838 187 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 IGHV1-46P01743 117 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 HMGN1P05114 100 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 ACSM4P0C7M7 580 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 ZNF23P17027 643 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 FASP25445 335 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 ENTPD1P49961 510 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 CCL8P80075 99 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 FAM209AQ5JX71 171 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 CMBLQ96DG6 245 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 POM121Q96HA1 1249 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 C1QTNF5Q9BXJ0 243 aa17.95■□□□□ 0.46
PNKP-209ENST00000596726 PAPOLBQ9NRJ5 636 aaKnown RBP17.95■□□□□ 0.46
PNKP-209ENST00000596726 DDX28Q9NUL7 540 aaKnown RBP17.95■□□□□ 0.46
PNKP-209ENST00000596726 SONP18583 2426 aaKnown RBP17.94■□□□□ 0.46
PNKP-209ENST00000596726 MALRD1Q5VYJ5 2156 aa17.94■□□□□ 0.46
PNKP-209ENST00000596726 PLSCR5A0PG75 271 aa17.94■□□□□ 0.46
PNKP-209ENST00000596726 INAFM1C9JVW0 142 aa17.94■□□□□ 0.46
PNKP-209ENST00000596726 ZNF593O00488 134 aaPredicted RBP17.94■□□□□ 0.46
PNKP-209ENST00000596726 IGHV4-31P0DP07 118 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms