RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 MS4A2Q01362 244 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 KRTAP27-1Q3LI81 207 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 ZMAT1Q5H9K5 638 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 CLEC12AQ5QGZ9 265 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 SLC18B1Q6NT16 456 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 PGM2L1Q6PCE3 622 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 ARL9Q6T311 187 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 LYPD4Q6UWN0 246 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 C1orf229Q6ZS94 237 aaPredicted RBP11.04□□□□□ -0.64
LIG1-212ENST00000596549 OR51F2Q8NH61 342 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 ZNRF4Q8WWF5 429 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 CCL17Q92583 94 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 DIRC2Q96SL1 478 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 COQ7Q99807 217 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 SRA1Q9HD15 236 aaKnown RBP11.04□□□□□ -0.64
LIG1-212ENST00000596549 PNRC2Q9NPJ4 139 aaKnown RBP11.04□□□□□ -0.64
LIG1-212ENST00000596549 MRPL22Q9NWU5 206 aaKnown RBP11.04□□□□□ -0.64
LIG1-212ENST00000596549 PTTG3PQ9NZH4 202 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 ZDHHC8Q9ULC8 765 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 CDH10Q9Y6N8 788 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 ARHGAP32A7KAX9 2087 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 J3QW42 95 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 TNFRSF11BO00300 401 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 FAM107AO95990 144 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 GGT2P36268 569 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 IFNGR2P38484 337 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 CENPAP49450 140 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 PRSS12P56730 875 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.03□□□□□ -0.64
LIG1-212ENST00000596549 HLXQ14774 488 aaPredicted RBP11.03□□□□□ -0.64
LIG1-212ENST00000596549 RSPO1Q2MKA7 263 aaPredicted RBP11.03□□□□□ -0.64
LIG1-212ENST00000596549 SLC35F1Q5T1Q4 408 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 FBXW12Q6X9E4 464 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 ZNF771Q7L3S4 317 aaPredicted RBP11.03□□□□□ -0.64
LIG1-212ENST00000596549 OR5AS1Q8N127 324 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 OR52E2Q8NGJ4 325 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 HAVCR1Q96D42 359 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 RAB39BQ96DA2 213 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 CMBLQ96DG6 245 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 SIGLEC11Q96RL6 698 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 DCLRE1CQ96SD1 692 aaKnown RBP11.03□□□□□ -0.64
LIG1-212ENST00000596549 DDOQ99489 341 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 MAGIXQ9H6Y5 334 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 TMCC3Q9ULS5 477 aa11.03□□□□□ -0.64
LIG1-212ENST00000596549 TRAV20A0A0B4J274 112 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 PLPP2O43688 288 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 PNPP00491 289 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 AVPP01185 164 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 GASTP01350 101 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 IGHV2-70P01814 119 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 CALB2P22676 271 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 TUBG1P23258 451 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 NOS3P29474 1203 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 PYCR1P32322 319 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 SRP14P37108 136 aaKnown RBP11.02□□□□□ -0.65
LIG1-212ENST00000596549 RPS27P42677 84 aaKnown RBP11.02□□□□□ -0.65
LIG1-212ENST00000596549 ZNF362Q5T0B9 420 aaPredicted RBP11.02□□□□□ -0.65
LIG1-212ENST00000596549 COLCA1Q6ZS62 124 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 ARHGAP24Q8N264 748 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 CYB561A3Q8NBI2 242 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 AQP11Q8NBQ7 271 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 GJC3Q8NFK1 279 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 OR2Z1Q8NG97 314 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 OR10AD1Q8NGE0 317 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 OR10S1Q8NGN2 331 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 OR4Q3Q8NH05 313 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 ITLN1Q8WWA0 313 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 TIMD4Q96H15 378 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 NSL1Q96IY1 281 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 MAP6Q96JE9 813 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 CLPTM1LQ96KA5 538 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 COG8Q96MW5 612 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 GAL3ST1Q99999 423 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 C19orf24Q9BVV8 132 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 TMPRSS13Q9BYE2 586 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 TRIM15Q9C019 465 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 EGLN1Q9GZT9 426 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 MUC13Q9H3R2 512 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 WDR76Q9H967 626 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 TUBG2Q9NRH3 451 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 IL20Q9NYY1 176 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 CYB5R1Q9UHQ9 305 aa11.02□□□□□ -0.65
LIG1-212ENST00000596549 ISPDA4D126 451 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 MLNRO43193 412 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 IDH3BO43837 385 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 KRT36O76013 467 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 CCNB2O95067 398 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 SOX14O95416 240 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 ACSM4P0C7M7 580 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 RAC2P15153 192 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 PCMT1P22061 227 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 RGS6P49758 472 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 MMP16P51512 607 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 MNAT1P51948 309 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 TRIM25Q14258 630 aaKnown RBP11.01□□□□□ -0.65
LIG1-212ENST00000596549 OR2T2Q6IF00 324 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 ACSM5Q6NUN0 579 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 RPL13AP3Q6NVV1 102 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 RASSF6Q6ZTQ3 369 aa11.01□□□□□ -0.65
LIG1-212ENST00000596549 DHFR2Q86XF0 187 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms