RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 WDFY1Q8IWB7 410 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 BPIFB2Q8N4F0 458 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 ACBD4Q8NC06 268 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 TMEM185AQ8NFB2 350 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 OR4S1Q8NGB4 309 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 SAV1Q9H4B6 383 aaPredicted RBP14.76□□□□□ -0.05
LIG1-206ENST00000594067 UCK1Q9HA47 277 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 MYOZ1Q9NP98 299 aaPredicted RBP14.76□□□□□ -0.05
LIG1-206ENST00000594067 COPS7AQ9UBW8 275 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 KLK13Q9UKR3 277 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 CEP290O15078 2479 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 KANTRA0A1W2PQU2 76 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 SIGLEC6O43699 453 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 SRSF10O75494 262 aaKnown RBP14.76□□□□□ -0.05
LIG1-206ENST00000594067 OR2F2O95006 317 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 CYB5AP00167 134 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 LBX1P52954 281 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 DHRS2Q13268 280 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 OR2F1Q13607 317 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 BEX5Q5H9J7 111 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 C16orf47Q6ZP98 133 aaPredicted RBP14.76□□□□□ -0.05
LIG1-206ENST00000594067 OR1L3Q8NH93 324 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 DAZLQ92904 295 aaKnown RBP14.76□□□□□ -0.05
LIG1-206ENST00000594067 ZDHHC12Q96GR4 267 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 VRK1Q99986 396 aaPredicted RBP14.76□□□□□ -0.05
LIG1-206ENST00000594067 G6PC2Q9NQR9 355 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 OR52A1Q9UKL2 312 aa14.76□□□□□ -0.05
LIG1-206ENST00000594067 FREM3P0C091 2139 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 RNF222A6NCQ9 220 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 ZNF736B4DX44 427 aaPredicted RBP14.75□□□□□ -0.05
LIG1-206ENST00000594067 C2CD4DB7Z1M9 353 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 H2AFB1P0C5Y9 115 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 SLC25A4P12235 298 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 ZNF823P16415 610 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 FSTP19883 344 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 CRABP1P29762 137 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 ARL4DP49703 201 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 SLC26A5P58743 744 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 NKPD1Q17RQ9 610 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 SHISA6Q6ZSJ9 500 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 GRINAQ7Z429 371 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 OR4D6Q8NGJ1 314 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 EDEM2Q9BV94 578 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 FAM117AQ9C073 453 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 CYB5R1Q9UHQ9 305 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 P2RY10O00398 339 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 EIF1AYO14602 144 aaKnown RBP14.75□□□□□ -0.05
LIG1-206ENST00000594067 LDLRAD4O15165 306 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 TO15178 435 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 BCL2L11O43521 198 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 FADS1O60427 444 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 MTRF1O75570 445 aaKnown RBP14.75□□□□□ -0.05
LIG1-206ENST00000594067 FBLP22087 321 aaKnown RBP14.75□□□□□ -0.05
LIG1-206ENST00000594067 PNLIPRP2P54317 469 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 TAF13Q15543 124 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 LRRC37A5PQ49AS3 106 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 CORO6Q6QEF8 472 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 LANCL3Q6ZV70 420 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 CD163Q86VB7 1156 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 NARS2Q96I59 477 aaKnown RBP14.75□□□□□ -0.05
LIG1-206ENST00000594067 SEC22AQ96IW7 307 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 SLC6A7Q99884 636 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 ZNF471Q9BX82 626 aaPredicted RBP14.75□□□□□ -0.05
LIG1-206ENST00000594067 SCPEP1Q9HB40 452 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 CENPMQ9NSP4 180 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 MKL2Q9ULH7 1088 aa14.75□□□□□ -0.05
LIG1-206ENST00000594067 LOC100509620A0A075B734 347 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 IGKV1D-43A0A0B4J1Z2 117 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 TMEM269A0A1B0GVZ9 245 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 RHPN2P1A8MT19 583 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 IGHMP01871 453 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 CD38P28907 300 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 OR1D5P58170 312 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 PPIAP62937 165 aaKnown RBP14.74□□□□□ -0.05
LIG1-206ENST00000594067 PAN3Q58A45 887 aaKnown RBP14.74□□□□□ -0.05
LIG1-206ENST00000594067 BOLLQ8N9W6 283 aaKnown RBP14.74□□□□□ -0.05
LIG1-206ENST00000594067 OR1N1Q8NGS0 311 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 ZNF304Q9HCX3 659 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 FBXO9Q9UK97 447 aaPredicted RBP14.74□□□□□ -0.05
LIG1-206ENST00000594067 KCNK7Q9Y2U2 307 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 RP1P56715 2156 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 BRWD1Q9NSI6 2320 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 CCSO14618 274 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 ATG12O94817 140 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 ARRB1P49407 418 aaPredicted RBP14.74□□□□□ -0.05
LIG1-206ENST00000594067 ZNF248Q8NDW4 579 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 OR13C8Q8NGS7 320 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 CMBLQ96DG6 245 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 PHYHIPLQ96FC7 376 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 LAMA1P25391 3075 aa14.74□□□□□ -0.05
LIG1-206ENST00000594067 IGHV3-20A0A0C4DH32 117 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 MS4A18H0YCH9 400 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 CD34P28906 385 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 SNTB1Q13884 538 aaKnown RBP14.73□□□□□ -0.05
LIG1-206ENST00000594067 MS4A18Q3C1V0 323 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 SLC26A10Q8NG04 563 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 PPP1R1CQ8WVI7 109 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 ARL5BQ96KC2 179 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 VN1R1Q9GZP7 353 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 PIGMQ9H3S5 423 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms