RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ANKRD16Q6P6B7 361 aa17.16■□□□□ 0.34
LSM4-203ENST00000593829 GNPDA2Q8TDQ7 276 aa17.16■□□□□ 0.34
LSM4-203ENST00000593829 ZNF837Q96EG3 531 aaPredicted RBP17.16■□□□□ 0.34
LSM4-203ENST00000593829 PIK3IP1Q96FE7 263 aa17.16■□□□□ 0.34
LSM4-203ENST00000593829 SOSTQ9BQB4 213 aa17.16■□□□□ 0.34
LSM4-203ENST00000593829 MRPL13Q9BYD1 178 aaKnown RBP17.16■□□□□ 0.34
LSM4-203ENST00000593829 RANGRFQ9HD47 186 aaPredicted RBP17.16■□□□□ 0.34
LSM4-203ENST00000593829 DNAJC27Q9NZQ0 273 aa17.16■□□□□ 0.34
LSM4-203ENST00000593829 NUFIP1Q9UHK0 495 aaKnown RBP17.16■□□□□ 0.34
LSM4-203ENST00000593829 ZNF346Q9UL40 294 aaKnown RBP17.16■□□□□ 0.34
LSM4-203ENST00000593829 CYSRT1A8MQ03 144 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 RAB36O95755 333 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 CD14P08571 375 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 AZGP1P25311 298 aaKnown RBP17.15■□□□□ 0.34
LSM4-203ENST00000593829 COX10Q12887 443 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 HIKESHIQ53FT3 197 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 FAM205BPQ63HN1 556 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 WDR31Q8NA23 367 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 BCL2L2Q92843 193 aaPredicted RBP17.15■□□□□ 0.34
LSM4-203ENST00000593829 KATNB1Q9BVA0 655 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 PLSCR3Q9NRY6 295 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 AMDHD2Q9Y303 409 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 SLC25A15Q9Y619 301 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 A0A1W2PQL4 384 aaPredicted RBP17.15■□□□□ 0.34
LSM4-203ENST00000593829 A0A1W2PR80 420 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 A8MV72 311 aaPredicted RBP17.15■□□□□ 0.34
LSM4-203ENST00000593829 PLA2G10O15496 165 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 KRTAP10-9P60411 292 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 ERVK-25P63136 954 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 TSPAN31Q12999 210 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 TNK1Q13470 666 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 TPBGQ13641 420 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 RIN1Q13671 783 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 Q5BKY6 102 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 LCN1P1Q5VSP4 162 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 KLHL24Q6TFL4 600 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 DUSP18Q8NEJ0 188 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 TSPAN32Q96QS1 320 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 BOLA1Q9Y3E2 137 aa17.15■□□□□ 0.34
LSM4-203ENST00000593829 CACNA1DQ01668 2161 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 ALPK2Q86TB3 2170 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 A0A0B4J293 547 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.14■□□□□ 0.33
LSM4-203ENST00000593829 A6NIZ1 184 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 TMCC2O75069 709 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 ACVR1BP36896 505 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 RAP1BP61224 184 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 RAP1AP62834 184 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 PPP3R1P63098 170 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 HNRNPA0Q13151 305 aaKnown RBP17.14■□□□□ 0.33
LSM4-203ENST00000593829 HIST3H3Q16695 136 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 LRFN4Q6PJG9 635 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 SMARCD3Q6STE5 483 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 SEZ6L2Q6UXD5 910 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 SYT14Q8NB59 555 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 NOXO1Q8NFA2 376 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 OR52I1Q8NGK6 324 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 PLPPR2Q96GM1 343 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 DIRAS2Q96HU8 199 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 KCTD7Q96MP8 289 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 GPX7Q96SL4 187 aaPredicted RBP17.14■□□□□ 0.33
LSM4-203ENST00000593829 FGF20Q9NP95 211 aaPredicted RBP17.14■□□□□ 0.33
LSM4-203ENST00000593829 OBP2BQ9NPH6 170 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 RPRD1BQ9NQG5 326 aaKnown RBP17.14■□□□□ 0.33
LSM4-203ENST00000593829 DIABLOQ9NR28 239 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 GRHPRQ9UBQ7 328 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 APCP25054 2843 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 ITPR2Q14571 2701 aa17.14■□□□□ 0.33
LSM4-203ENST00000593829 A0A096LPE4 126 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 A0A1W2PPZ6 126 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 TMEM129A0AVI4 362 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 WNT11O96014 354 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 TP53P04637 393 aaPredicted RBP17.13■□□□□ 0.33
LSM4-203ENST00000593829 QDPRP09417 244 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 HOXB1P14653 301 aaPredicted RBP17.13■□□□□ 0.33
LSM4-203ENST00000593829 FGF9P31371 208 aaPredicted RBP17.13■□□□□ 0.33
LSM4-203ENST00000593829 GZMKP49863 264 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 FXYD6P3P58550 94 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 EFNB1P98172 346 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 KLHL22Q53GT1 634 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 THSD4Q6ZMP0 1018 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 CDC20BQ86Y33 519 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 FANK1Q8TC84 345 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 MED30Q96HR3 178 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 LURAP1Q96LR2 239 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 FYTTD1Q96QD9 318 aaKnown RBP17.13■□□□□ 0.33
LSM4-203ENST00000593829 ESRP2Q9H6T0 727 aaKnown RBP17.13■□□□□ 0.33
LSM4-203ENST00000593829 SF3B6Q9Y3B4 125 aaKnown RBP17.13■□□□□ 0.33
LSM4-203ENST00000593829 ADAM18Q9Y3Q7 739 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 C1QBP02746 253 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 NR2C1P13056 603 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 UBE2NP61088 152 aaKnown RBP17.13■□□□□ 0.33
LSM4-203ENST00000593829 LIPKQ5VXJ0 399 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 CD200R1LQ6Q8B3 271 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 DPY19L2P2Q6ZN68 376 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 ARIH2OSQ8N7S6 290 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 ZNF519Q8TB69 540 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 ENKURQ8TC29 256 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 MCHR2Q969V1 340 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 KCNK17Q96T54 332 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms