RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 PURGQ9UJV8 347 aaKnown RBP17.12■□□□□ 0.33
CIRBP-239ENST00000592467 UBOX5O94941 541 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 LIPAP38571 399 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 TEKQ02763 1124 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 MICAQ29983 383 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 CR1LQ2VPA4 569 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 RPL13AP3Q6NVV1 102 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 AQP11Q8NBQ7 271 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 GJC3Q8NFK1 279 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 OR4Q3Q8NH05 313 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 HAVCR1Q96D42 359 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 DCLRE1CQ96SD1 692 aaKnown RBP17.11■□□□□ 0.33
CIRBP-239ENST00000592467 DGCR6LQ9BY27 220 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 NARFLQ9H6Q4 476 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 DECR2Q9NUI1 292 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 CYB5R1Q9UHQ9 305 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 ZDHHC8Q9ULC8 765 aa17.11■□□□□ 0.33
CIRBP-239ENST00000592467 PLSCR5A0PG75 271 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 J3QW42 95 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 PSKH1P11801 424 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 NOS3P29474 1203 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 CENPAP49450 140 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 DVL1P1P54792 670 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-239ENST00000592467 FAM98BQ52LJ0 330 aaKnown RBP17.1■□□□□ 0.33
CIRBP-239ENST00000592467 AVPI1Q5T686 147 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 COLCA1Q6ZS62 124 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 TRPM8Q7Z2W7 1104 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-239ENST00000592467 LINC00346Q8IVM7 164 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 LNX2Q8N448 690 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 CCDC124Q96CT7 223 aaKnown RBP17.1■□□□□ 0.33
CIRBP-239ENST00000592467 SLC7A6OSQ96CW6 309 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-239ENST00000592467 CMBLQ96DG6 245 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 THTPAQ9BU02 230 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 HDHD2Q9H0R4 259 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 TREM2Q9NZC2 230 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 U3KQV3 271 aa17.1■□□□□ 0.33
CIRBP-239ENST00000592467 DYSFO75923 2080 aa17.09■□□□□ 0.33
CIRBP-239ENST00000592467 DEAF1O75398 565 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-239ENST00000592467 RAP2AP10114 183 aa17.09■□□□□ 0.33
CIRBP-239ENST00000592467 GSTM3P21266 225 aa17.09■□□□□ 0.33
CIRBP-239ENST00000592467 RBMXP38159 391 aaKnown RBP17.09■□□□□ 0.33
CIRBP-239ENST00000592467 TRAP1Q12931 704 aaKnown RBP17.09■□□□□ 0.33
CIRBP-239ENST00000592467 FBXW12Q6X9E4 464 aa17.09■□□□□ 0.33
CIRBP-239ENST00000592467 CXXC5Q7LFL8 322 aaKnown RBP17.09■□□□□ 0.33
CIRBP-239ENST00000592467 CYB561A3Q8NBI2 242 aa17.09■□□□□ 0.33
CIRBP-239ENST00000592467 SLC37A3Q8NCC5 494 aa17.09■□□□□ 0.33
CIRBP-239ENST00000592467 OR10S1Q8NGN2 331 aa17.09■□□□□ 0.33
CIRBP-239ENST00000592467 PTP4A1Q93096 173 aa17.09■□□□□ 0.33
CIRBP-239ENST00000592467 POP5Q969H6 163 aaKnown RBP17.09■□□□□ 0.33
CIRBP-239ENST00000592467 ELMOD3Q96FG2 381 aa17.09■□□□□ 0.33
CIRBP-239ENST00000592467 DIRC2Q96SL1 478 aa17.09■□□□□ 0.33
CIRBP-239ENST00000592467 POLR1DQ9Y2S0 133 aa17.09■□□□□ 0.33
CIRBP-239ENST00000592467 SAMHD1Q9Y3Z3 626 aaKnown RBP17.09■□□□□ 0.33
CIRBP-239ENST00000592467 WIPI2Q9Y4P8 454 aa17.09■□□□□ 0.33
CIRBP-239ENST00000592467 B4DSR2 109 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 TIMM8AO60220 97 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-239ENST00000592467 IFNA2P01563 188 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 PYCR1P32322 319 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 THBS2P35442 1172 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 RGS6P49758 472 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 MVKQ03426 396 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 HLXQ14774 488 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-239ENST00000592467 LYPD4Q6UWN0 246 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 TMEM179BQ7Z7N9 219 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 OR52L1Q8NGH7 329 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 BCAS4Q8TDM0 211 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 MAP6Q96JE9 813 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 COG8Q96MW5 612 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 NIPSNAP1Q9BPW8 284 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 RBM4Q9BWF3 364 aaKnown RBP17.08■□□□□ 0.32
CIRBP-239ENST00000592467 CHID1Q9BWS9 393 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 C1QTNF5Q9BXJ0 243 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 NMNAT2Q9BZQ4 307 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 REEP1Q9H902 201 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 DCAF16Q9NXF7 216 aa17.08■□□□□ 0.32
CIRBP-239ENST00000592467 AQP12BA6NM10 295 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 CLDN25C9JDP6 229 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 TPD52L2O43399 206 aaKnown RBP17.07■□□□□ 0.32
CIRBP-239ENST00000592467 SOX14O95416 240 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 ACSM4P0C7M7 580 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 RAC2P15153 192 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 SRD5A1P18405 259 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 HFEQ30201 348 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 SLC36A3Q495N2 470 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 ZMAT1Q5H9K5 638 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 CD300LDQ6UXZ3 194 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 AQP12AQ8IXF9 295 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 CANT1Q8WVQ1 401 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 TSSK6Q9BXA6 273 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 ZNF665Q9H7R5 613 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 ARMC1Q9NVT9 282 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 PTTG3PQ9NZH4 202 aa17.07■□□□□ 0.32
CIRBP-239ENST00000592467 TMEFF2Q9UIK5 374 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-239ENST00000592467 MSMBP08118 114 aa17.06■□□□□ 0.32
CIRBP-239ENST00000592467 ANOS1P23352 680 aa17.06■□□□□ 0.32
CIRBP-239ENST00000592467 RPS27P42677 84 aaKnown RBP17.06■□□□□ 0.32
CIRBP-239ENST00000592467 TNFAIP6P98066 277 aaPredicted RBP17.06■□□□□ 0.32
CIRBP-239ENST00000592467 CRMP1Q14194 572 aa17.06■□□□□ 0.32
CIRBP-239ENST00000592467 NAA40Q86UY6 237 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms