RNA–Protein interactions for RNA: ENST00000592076.5

TMC6-222, Transcript of transmembrane channel like 6, human

TSL 3

Gene TMC6, Length 693 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-222	ENST00000592076	COL8A2	P25067	703 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	PYCR1	P32322	319 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	TMEM33	P57088	247 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	ECH1	Q13011	328 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	RIN1	Q13671	783 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	USP51	Q70EK9	711 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	SLC37A3	Q8NCC5	494 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	OR9Q1	Q8NGQ5	310 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	HPS1	Q92902	700 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	ELMOD3	Q96FG2	381 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	DIRC2	Q96SL1	478 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	FEV	Q99581	238 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	ATF6B	Q99941	703 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	NIPSNAP1	Q9BPW8	284 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	DNAJB9	Q9UBS3	223 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	ZDHHC8	Q9ULC8	765 aa		13.87	□□□□□ -0.19
TMC6-222	ENST00000592076	IGHV1-69-2	A0A0G2JMI3	117 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	TCRBV3S1	A0A5B6	114 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	GSC2	O15499	205 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	TF	P02787	698 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	DBH	P09172	617 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	TACSTD2	P09758	323 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	PAICS	P22234	425 aa	Known RBP	13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	TNFSF4	P23510	183 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	POU1F1	P28069	291 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	FMO3	P31513	532 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	ERF	P50548	548 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	BLVRA	P53004	296 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	CRMP1	Q14194	572 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	HFE	Q30201	348 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	CHRFAM7A	Q494W8	412 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	SLC18B1	Q6NT16	456 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	CD300LD	Q6UXZ3	194 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	OR6K6	Q8NGW6	343 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	OR4Q3	Q8NH05	313 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	GTF3A	Q92664	365 aa	Known RBP	13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	PTP4A1	Q93096	173 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	YIPF5	Q969M3	257 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	OTULIN	Q96BN8	352 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	CMBL	Q96DG6	245 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	TIMD4	Q96H15	378 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	TEX12	Q9BXU0	123 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	CADM1	Q9BY67	442 aa	Known RBP	13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	NARFL	Q9H6Q4	476 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	KIF17	Q9P2E2	1029 aa		13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	PURG	Q9UJV8	347 aa	Known RBP	13.86	□□□□□ -0.19
TMC6-222	ENST00000592076	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.85	□□□□□ -0.19	6e-8	■■■□□ 18.3
TMC6-222	ENST00000592076	MALRD1	Q5VYJ5	2156 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	NF1	P21359	2839 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	NIPBL	Q6KC79	2804 aa	eCLIP	13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	TVP23A	A6NH52	213 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	ZSCAN5B	A6NJL1	495 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	CLDN25	C9JDP6	229 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076		F5H5K5	113 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	LMX1B	O60663	402 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	LILRA1	O75019	489 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	DEAF1	O75398	565 aa	Predicted RBP	13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	TGFA	P01135	160 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	IGHV1-46	P01743	117 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	SPARC	P09486	303 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	ANXA8	P13928	327 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	GRK5	P34947	590 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	MMP15	P51511	669 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	HIST1H3A	P68431	136 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	PSG7	Q13046	419 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	CCNI	Q14094	377 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	TRIP10	Q15642	601 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	HIST2H3PS2	Q5TEC6	136 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	CFAP77	Q6ZQR2	320 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	HIST2H3A	Q71DI3	136 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	ATG16L2	Q8NAA4	619 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	OR51L1	Q8NGJ5	315 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	SPTSSA	Q969W0	71 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	MSL2	Q9HCI7	577 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	PTTG3P	Q9NZH4	202 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	LPAR3	Q9UBY5	353 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	CYB5R1	Q9UHQ9	305 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	CDC42EP3	Q9UKI2	254 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	STARD10	Q9Y365	291 aa		13.85	□□□□□ -0.19
TMC6-222	ENST00000592076	GYPB	P06028	91 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	RAC2	P15153	192 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	HNF1A	P20823	631 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	GGT2	P36268	569 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	CRYBB2	P43320	205 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	SLC6A9	P48067	706 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	SLC25A1	P53007	311 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	TPTE	P56180	551 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	TNFAIP6	P98066	277 aa	Predicted RBP	13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	SLC3A1	Q07837	685 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	DBP	Q10586	325 aa	Predicted RBP	13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	TAF13	Q15543	124 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	C1orf146	Q5VVC0	180 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	SLC27A4	Q6P1M0	643 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	HIPK1	Q86Z02	1210 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	IQCF1	Q8N6M8	205 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	MSI2	Q96DH6	328 aa	Known RBP	13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	PLEKHA8	Q96JA3	519 aa		13.84	□□□□□ -0.19
TMC6-222	ENST00000592076	RBM4	Q9BWF3	364 aa	Known RBP	13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms