RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 SLC3A1Q07837 685 aa12.66□□□□□ -0.38
NPC1-207ENST00000588867 ARL9Q6T311 187 aa12.66□□□□□ -0.38
NPC1-207ENST00000588867 EGFL6Q8IUX8 553 aa12.66□□□□□ -0.38
NPC1-207ENST00000588867 OR1F12Q8NHA8 337 aa12.66□□□□□ -0.38
NPC1-207ENST00000588867 HDHD2Q9H0R4 259 aa12.66□□□□□ -0.38
NPC1-207ENST00000588867 NOX3Q9HBY0 568 aa12.66□□□□□ -0.38
NPC1-207ENST00000588867 ERRFI1Q9UJM3 462 aaPredicted RBP12.66□□□□□ -0.38
NPC1-207ENST00000588867 TMEM269A0A1B0GVZ9 245 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 SYNGR3O43761 229 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 HTR5AP47898 357 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 BDH1Q02338 343 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 PLP2Q04941 152 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 TPBGQ13641 420 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 GPR107Q5VW38 600 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 RPL22L1Q6P5R6 122 aaKnown RBP12.65□□□□□ -0.38
NPC1-207ENST00000588867 DPPA2Q7Z7J5 298 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 MDP1Q86V88 176 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 PHC2Q8IXK0 858 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 CCDC36Q8IYA8 594 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 ZNF283Q8N7M2 679 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 CPEB3Q8NE35 698 aaKnown RBP12.65□□□□□ -0.38
NPC1-207ENST00000588867 KCNJ15Q99712 375 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 C1QTNF6Q9BXI9 259 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 HDHD5Q9BXW7 423 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 BATF3Q9NR55 127 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 SLC17A5Q9NRA2 495 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 DDX28Q9NUL7 540 aaKnown RBP12.65□□□□□ -0.38
NPC1-207ENST00000588867 ELOVL5Q9NYP7 299 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 JKAMPQ9P055 326 aa12.65□□□□□ -0.38
NPC1-207ENST00000588867 CCDC160A6NGH7 325 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 H3BSA7 217 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 C1QL1O75973 258 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 PNPP00491 289 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 DBHP09172 617 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 HOXB1P14653 301 aaPredicted RBP12.64□□□□□ -0.39
NPC1-207ENST00000588867 TTKP33981 857 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 NANOS3P60323 173 aaKnown RBP12.64□□□□□ -0.39
NPC1-207ENST00000588867 MFGE8Q08431 387 aaPredicted RBP12.64□□□□□ -0.39
NPC1-207ENST00000588867 ECH1Q13011 328 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 MRPL28Q13084 256 aaKnown RBP12.64□□□□□ -0.39
NPC1-207ENST00000588867 SSX1Q16384 188 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 CCDC58Q4VC31 144 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 ALKBH2Q6NS38 261 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 CLVS1Q8IUQ0 354 aaPredicted RBP12.64□□□□□ -0.39
NPC1-207ENST00000588867 ASB5Q8WWX0 329 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 TMEM203Q969S6 136 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 SPTSSAQ969W0 71 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 RNF166Q96A37 237 aaPredicted RBP12.64□□□□□ -0.39
NPC1-207ENST00000588867 S100PBPQ96BU1 408 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 FUNDC2Q9BWH2 189 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 NIPAL2Q9H841 368 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 B3GNT2Q9NY97 397 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 FRRS1LQ9P0K9 344 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 ST6GALNAC2Q9UJ37 374 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 RTTNQ86VV8 2226 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 IQCMA0A1B0GVH7 501 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 FAM90A27PA6NNH2 459 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 LOC110117498-PIK3R3F6TDL0 507 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 OGG1O15527 345 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 AGFG2O95081 481 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 SLC2A1P11166 492 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 PSMB1P20618 241 aaKnown RBP12.64□□□□□ -0.39
NPC1-207ENST00000588867 CCNOP22674 350 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 APEX1P27695 318 aaKnown RBP12.64□□□□□ -0.39
NPC1-207ENST00000588867 SLC6A9P48067 706 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 TGM4P49221 684 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 CX3CR1P49238 355 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 ALKBH1Q13686 389 aaKnown RBP12.64□□□□□ -0.39
NPC1-207ENST00000588867 CDK5R1Q15078 307 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 ODF4Q2M2E3 257 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 ZNF829Q3KNS6 432 aaPredicted RBP12.64□□□□□ -0.39
NPC1-207ENST00000588867 C4orf17Q53FE4 359 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 NAA40Q86UY6 237 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 C17orf78Q8N4C9 275 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 WDR31Q8NA23 367 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 OR2G2Q8NGZ5 317 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 HAVCR2Q8TDQ0 301 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 CA5BP1Q8WTZ4 195 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 PPP1R14AQ96A00 147 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 YIPF6Q96EC8 236 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 TMED9Q9BVK6 235 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 R4GMQ9 66 aa12.64□□□□□ -0.39
NPC1-207ENST00000588867 OR6C6A6NF89 314 aa12.63□□□□□ -0.39
NPC1-207ENST00000588867 OR5H1A6NKK0 313 aa12.63□□□□□ -0.39
NPC1-207ENST00000588867 PLPP2O43688 288 aa12.63□□□□□ -0.39
NPC1-207ENST00000588867 NR4A1P22736 598 aa12.63□□□□□ -0.39
NPC1-207ENST00000588867 DCTDP32321 178 aa12.63□□□□□ -0.39
NPC1-207ENST00000588867 TGFBR2P37173 567 aa12.63□□□□□ -0.39
NPC1-207ENST00000588867 GDI2P50395 445 aaKnown RBP12.63□□□□□ -0.39
NPC1-207ENST00000588867 RSPO1Q2MKA7 263 aaPredicted RBP12.63□□□□□ -0.39
NPC1-207ENST00000588867 DMKNQ6E0U4 476 aaPredicted RBP12.63□□□□□ -0.39
NPC1-207ENST00000588867 ZNF544Q6NX49 715 aa12.63□□□□□ -0.39
NPC1-207ENST00000588867 MTFR2Q6P444 385 aa12.63□□□□□ -0.39
NPC1-207ENST00000588867 PRSS35Q8N3Z0 413 aa12.63□□□□□ -0.39
NPC1-207ENST00000588867 GHSRQ92847 366 aa12.63□□□□□ -0.39
NPC1-207ENST00000588867 BOD1Q96IK1 185 aa12.63□□□□□ -0.39
NPC1-207ENST00000588867 COQ7Q99807 217 aa12.63□□□□□ -0.39
NPC1-207ENST00000588867 PDCD1LG2Q9BQ51 273 aa12.63□□□□□ -0.39
NPC1-207ENST00000588867 ACTR6Q9GZN1 396 aa12.63□□□□□ -0.39
NPC1-207ENST00000588867 SLC22A13Q9Y226 551 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms