RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 IPCEF1Q8WWN9 437 aaPredicted RBP16.42■□□□□ 0.22
CIRBP-217ENST00000588230 OTULINQ96BN8 352 aa16.42■□□□□ 0.22
CIRBP-217ENST00000588230 DCLRE1CQ96SD1 692 aaKnown RBP16.42■□□□□ 0.22
CIRBP-217ENST00000588230 COQ7Q99807 217 aa16.42■□□□□ 0.22
CIRBP-217ENST00000588230 NMNAT2Q9BZQ4 307 aa16.42■□□□□ 0.22
CIRBP-217ENST00000588230 TUBG2Q9NRH3 451 aa16.42■□□□□ 0.22
CIRBP-217ENST00000588230 CYB5R1Q9UHQ9 305 aa16.42■□□□□ 0.22
CIRBP-217ENST00000588230 PLSCR5A0PG75 271 aa16.41■□□□□ 0.22
CIRBP-217ENST00000588230 C17orf100A8MU93 164 aa16.41■□□□□ 0.22
CIRBP-217ENST00000588230 DBHP09172 617 aa16.41■□□□□ 0.22
CIRBP-217ENST00000588230 SPI1P17947 270 aa16.41■□□□□ 0.22
CIRBP-217ENST00000588230 USF1P22415 310 aaPredicted RBP16.41■□□□□ 0.22
CIRBP-217ENST00000588230 RGS6P49758 472 aa16.41■□□□□ 0.22
CIRBP-217ENST00000588230 LOXL1Q08397 574 aaPredicted RBP16.41■□□□□ 0.22
CIRBP-217ENST00000588230 ECH1Q13011 328 aa16.41■□□□□ 0.22
CIRBP-217ENST00000588230 ACSM5Q6NUN0 579 aa16.41■□□□□ 0.22
CIRBP-217ENST00000588230 CFAP77Q6ZQR2 320 aa16.41■□□□□ 0.22
CIRBP-217ENST00000588230 ZNRF4Q8WWF5 429 aa16.41■□□□□ 0.22
CIRBP-217ENST00000588230 DNAJC9Q8WXX5 260 aa16.41■□□□□ 0.22
CIRBP-217ENST00000588230 DUS3LQ96G46 650 aaKnown RBP16.41■□□□□ 0.22
CIRBP-217ENST00000588230 COG8Q96MW5 612 aa16.41■□□□□ 0.22
CIRBP-217ENST00000588230 TEX12Q9BXU0 123 aa16.41■□□□□ 0.22
CIRBP-217ENST00000588230 DNHD1Q96M86 4753 aa16.41■□□□□ 0.22
CIRBP-217ENST00000588230 VWC2LB2RUY7 222 aa16.4■□□□□ 0.22
CIRBP-217ENST00000588230 HPXP02790 462 aa16.4■□□□□ 0.22
CIRBP-217ENST00000588230 HMGN1P05114 100 aa16.4■□□□□ 0.22
CIRBP-217ENST00000588230 CLUP10909 449 aa16.4■□□□□ 0.22
CIRBP-217ENST00000588230 FCGR1AP12314 374 aa16.4■□□□□ 0.22
CIRBP-217ENST00000588230 PAICSP22234 425 aaKnown RBP16.4■□□□□ 0.22
CIRBP-217ENST00000588230 NR4A2P43354 598 aa16.4■□□□□ 0.22
CIRBP-217ENST00000588230 BLVRAP53004 296 aa16.4■□□□□ 0.22
CIRBP-217ENST00000588230 GGTLC2Q14390 218 aa16.4■□□□□ 0.22
CIRBP-217ENST00000588230 PCGF3Q3KNV8 242 aa16.4■□□□□ 0.22
CIRBP-217ENST00000588230 LYPD4Q6UWN0 246 aa16.4■□□□□ 0.22
CIRBP-217ENST00000588230 HIPK1Q86Z02 1210 aa16.4■□□□□ 0.22
CIRBP-217ENST00000588230 OR6K6Q8NGW6 343 aa16.4■□□□□ 0.22
CIRBP-217ENST00000588230 PAPOLBQ9NRJ5 636 aaKnown RBP16.4■□□□□ 0.22
CIRBP-217ENST00000588230 STARD10Q9Y365 291 aa16.4■□□□□ 0.22
CIRBP-217ENST00000588230 SVEP1Q4LDE5 3571 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 YLPM1P49750 1951 aaKnown RBP16.39■□□□□ 0.21
CIRBP-217ENST00000588230 FAM183AA6NL82 134 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 LYNX1G3V0Z9 82 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 G3V2T6 193 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 LYNX1P0DP58 116 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 GIFP27352 417 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 MAGEB1P43366 347 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 ZNF81P51508 661 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 FAHD1Q6P587 224 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 PRIMA1Q86XR5 153 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 ZNF511Q8NB15 262 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 OR5L1Q8NGL2 311 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 RDH5Q92781 318 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 APOBEC3DQ96AK3 386 aaPredicted RBP16.39■□□□□ 0.21
CIRBP-217ENST00000588230 PLEKHA8Q96JA3 519 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 ATF6BQ99941 703 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 MED20Q9H944 212 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 WDR76Q9H967 626 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 CYSLTR2Q9NS75 346 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 COMMD3-BMI1R4GMX3 469 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 CUBNO60494 3623 aa16.39■□□□□ 0.21
CIRBP-217ENST00000588230 F5H5K5 113 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 J3QW42 95 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 TPD52L2O43399 206 aaKnown RBP16.38■□□□□ 0.21
CIRBP-217ENST00000588230 CD5LO43866 347 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 TIMM8AO60220 97 aaPredicted RBP16.38■□□□□ 0.21
CIRBP-217ENST00000588230 SPARCP09486 303 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 LIPAP38571 399 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 RPS27P42677 84 aaKnown RBP16.38■□□□□ 0.21
CIRBP-217ENST00000588230 ENTPD1P49961 510 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 DAPP51397 102 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 CCL8P80075 99 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 CDK5Q00535 292 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 PSG7Q13046 419 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 AMIGO2Q86SJ2 522 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 ZDHHC13Q8IUH4 622 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 GTF3AQ92664 365 aaKnown RBP16.38■□□□□ 0.21
CIRBP-217ENST00000588230 CMBLQ96DG6 245 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 MAP6Q96JE9 813 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 HCAR1Q9BXC0 346 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 BPESC1Q9GZL8 116 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 POFUT1Q9H488 388 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 DECR2Q9NUI1 292 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 NKIRAS2Q9NYR9 191 aa16.38■□□□□ 0.21
CIRBP-217ENST00000588230 CGGBP1Q9UFW8 167 aaPredicted RBP16.38■□□□□ 0.21
CIRBP-217ENST00000588230 PRR23D1E9PI22 279 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-217ENST00000588230 ZNF593O00488 134 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-217ENST00000588230 SURF4O15260 269 aa16.37■□□□□ 0.21
CIRBP-217ENST00000588230 SPRY3O43610 288 aa16.37■□□□□ 0.21
CIRBP-217ENST00000588230 NCR1O76036 304 aa16.37■□□□□ 0.21
CIRBP-217ENST00000588230 PRR23D2P0DMB1 279 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-217ENST00000588230 ZNF23P17027 643 aa16.37■□□□□ 0.21
CIRBP-217ENST00000588230 COL8A2P25067 703 aa16.37■□□□□ 0.21
CIRBP-217ENST00000588230 MMP15P51511 669 aa16.37■□□□□ 0.21
CIRBP-217ENST00000588230 CRISP1P54107 249 aa16.37■□□□□ 0.21
CIRBP-217ENST00000588230 MRPS11P82912 194 aaKnown RBP16.37■□□□□ 0.21
CIRBP-217ENST00000588230 TSTQ16762 297 aaKnown RBP16.37■□□□□ 0.21
CIRBP-217ENST00000588230 RSPO1Q2MKA7 263 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-217ENST00000588230 TMEM249Q2WGJ8 235 aa16.37■□□□□ 0.21
CIRBP-217ENST00000588230 ZMAT1Q5H9K5 638 aa16.37■□□□□ 0.21
CIRBP-217ENST00000588230 TMEM255AQ5JRV8 349 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms