RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 SYNPRQ8TBG9 265 aa10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 TRUB1Q8WWH5 349 aaKnown RBP10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 PTP4A1Q93096 173 aa10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 MRPL24Q96A35 216 aaKnown RBP10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 FOXC2Q99958 501 aa10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 APOL4Q9BPW4 351 aa10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 GSX2Q9BZM3 304 aa10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 VCX3BQ9H321 246 aa10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 MARCH7Q9H992 704 aa10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 BARX1Q9HBU1 254 aaPredicted RBP10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 TUBG2Q9NRH3 451 aa10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 CENPMQ9NSP4 180 aa10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 LAMP5Q9UJQ1 280 aa10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 TMEM14AQ9Y6G1 99 aa10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 AKAP6Q13023 2319 aa10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 PLCE1Q9P212 2302 aa10.24□□□□□ -0.77
SDHDP1-201ENST00000588055 ROS1P08922 2347 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 CSMD1Q96PZ7 3565 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 CYSRT1A8MQ03 144 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 F5H5K5 113 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 M0R135 149 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 M0R233 179 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 SELENOFO60613 162 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 ICMTO60725 284 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 APOC1P02654 83 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 LYNP07948 512 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 MRPL3P09001 348 aaKnown RBP10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 SLC2A5P22732 501 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 ATP6V1E1P36543 226 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 POLR2IP36954 125 aaKnown RBP10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 CDKN1AP38936 164 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 WNT5AP41221 380 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 PTH2RP49190 550 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 EVX1P49640 407 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 PPOXP50336 477 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 SLC34A1Q06495 639 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 PCK2Q16822 640 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 ZMAT1Q5H9K5 638 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 SPATA46Q5T0L3 261 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 MEDAGQ5VYS4 303 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 LPCAT4Q643R3 524 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 RFPL4BQ6ZWI9 263 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 MEPCEQ7L2J0 689 aaKnown RBP10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 SLC16A9Q7RTY1 509 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 TIGD4Q8IY51 512 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 ZNF101Q8IZC7 436 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 ZNRF4Q8WWF5 429 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 APOBEC3DQ96AK3 386 aaPredicted RBP10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 SLAMF6Q96DU3 332 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 ZNF799Q96GE5 643 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 MAP6Q96JE9 813 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 MBOAT4Q96T53 435 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 SLC29A1Q99808 456 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 SYT3Q9BQG1 590 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 RNPEPL1Q9HAU8 725 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 DDX28Q9NUL7 540 aaKnown RBP10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 TBCCD1Q9NVR7 557 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 SLCO1C1Q9NYB5 712 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 WARS2Q9UGM6 360 aaKnown RBP10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 DUSP13Q9UII6 198 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 FZR1Q9UM11 496 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 SPG11Q96JI7 2443 aa10.23□□□□□ -0.77
SDHDP1-201ENST00000588055 LOC100130705A0A1B0GUX0 176 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 PLSCR5A0PG75 271 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 H7C417 338 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 PHYHO14832 338 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 CASQ2O14958 399 aaPredicted RBP10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 DBHP09172 617 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 H2BFMP0C1H6 154 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 HTR1FP30939 366 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 MALLQ13021 153 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 TMED1Q13445 227 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 GGTLC2Q14390 218 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 OGFRL1Q5TC84 451 aaPredicted RBP10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 C11orf71Q6IPW1 123 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 KCTD18Q6PI47 426 aaPredicted RBP10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 SPATC1Q76KD6 591 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 SETD9Q8NE22 299 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 OTOSQ8NHW6 89 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 SLC25A40Q8TBP6 338 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 THEM6Q8WUY1 208 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 CYGBQ8WWM9 190 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 SLC7A6Q92536 515 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 Q96MT0 163 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 MNTQ99583 582 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 TEAD3Q99594 435 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 VRK1Q99986 396 aaPredicted RBP10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 MRPL37Q9BZE1 423 aaKnown RBP10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 YIPF3Q9GZM5 350 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 RAB1BQ9H0U4 201 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 SP140LQ9H930 580 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 PNRC2Q9NPJ4 139 aaKnown RBP10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 ZNF701Q9NV72 531 aaPredicted RBP10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 DNAJC27Q9NZQ0 273 aa10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 CGGBP1Q9UFW8 167 aaPredicted RBP10.22□□□□□ -0.77
SDHDP1-201ENST00000588055 CCDC182A6NF36 153 aa10.21□□□□□ -0.77
SDHDP1-201ENST00000588055 OVOL3O00110 214 aa10.21□□□□□ -0.77
SDHDP1-201ENST00000588055 TIMM8AO60220 97 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms