RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 TRAPPC2LH3BP13 241 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 HOXA3O43365 443 aaPredicted RBP7.22□□□□□ -1.25
SDF2-204ENST00000587338 SPRY3O43610 288 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 LYPD3O95274 346 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 CRYBA1P05813 215 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 IGHV4-38-2P0DP08 117 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 HLA-DOBP13765 273 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 ZNF12P17014 697 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 GRPRP30550 384 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 CAPGP40121 348 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 GPR4P46093 362 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 GSSP48637 474 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 ZNF81P51508 661 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 EGR4Q05215 589 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 SLC3A1Q07837 685 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 HNRNPA0Q13151 305 aaKnown RBP7.22□□□□□ -1.25
SDF2-204ENST00000587338 PMS2P3Q13401 168 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 MED21Q13503 144 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 RFX4Q33E94 735 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 ZNF362Q5T0B9 420 aaPredicted RBP7.22□□□□□ -1.25
SDF2-204ENST00000587338 KDM4DQ6B0I6 523 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 FAHD1Q6P587 224 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 WDR88Q6ZMY6 472 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 H1FNTQ75WM6 255 aaPredicted RBP7.22□□□□□ -1.25
SDF2-204ENST00000587338 ZNF627Q7L945 461 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 ZER1Q7Z7L7 766 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 PARP8Q8N3A8 854 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 OR52E2Q8NGJ4 325 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 FGFBP3Q8TAT2 258 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 ZNF519Q8TB69 540 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 TXNDC15Q96J42 360 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 MPP4Q96JB8 637 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 PRSS27Q9BQR3 290 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 PRDM4Q9UKN5 801 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 LRRC42Q9Y546 428 aa7.22□□□□□ -1.25
SDF2-204ENST00000587338 A0A087WUJ7 227 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 TRAV40A0A0B4J280 105 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 LOC100130705A0A1B0GUX0 176 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 PLSCR5A0PG75 271 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 ARRDC5A6NEK1 342 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 EFCAB9A8MZ26 197 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 PIN1P1O15428 100 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 OR2T1O43869 369 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 SERPINI2O75830 405 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 SOX14O95416 240 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 CLIC3O95833 236 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 TSPAN15O95858 294 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 IGHV1-46P01743 117 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 RPSAP08865 295 aaKnown RBP7.21□□□□□ -1.26
SDF2-204ENST00000587338 SBK2P0C263 348 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 OSMP13725 252 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 GSTM3P21266 225 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 POLR2IP36954 125 aaKnown RBP7.21□□□□□ -1.26
SDF2-204ENST00000587338 RBM34P42696 430 aaKnown RBP7.21□□□□□ -1.26
SDF2-204ENST00000587338 OMPP47874 163 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 SEC61A1P61619 476 aaKnown RBP7.21□□□□□ -1.26
SDF2-204ENST00000587338 RELBQ01201 579 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 PRKCDQ05655 676 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 MOGQ16653 247 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 TBC1D28Q2M2D7 210 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 FAM209AQ5JX71 171 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 SWT1Q5T5J6 900 aaKnown RBP7.21□□□□□ -1.26
SDF2-204ENST00000587338 FAM69AQ5T7M9 428 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 TTC23Q5W5X9 447 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 ASPHD2Q6ICH7 369 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 C1orf94Q6P1W5 598 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 FIP1L1Q6UN15 594 aaKnown RBP7.21□□□□□ -1.26
SDF2-204ENST00000587338 SKA3Q8IX90 412 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 RNF113BQ8IZP6 322 aaKnown RBP7.21□□□□□ -1.26
SDF2-204ENST00000587338 CPEB3Q8NE35 698 aaKnown RBP7.21□□□□□ -1.26
SDF2-204ENST00000587338 FAM110DQ8TAY7 271 aaPredicted RBP7.21□□□□□ -1.26
SDF2-204ENST00000587338 TAAR8Q969N4 342 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 ZDHHC16Q969W1 377 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 BPIFA2Q96DR5 249 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 LRR1Q96L50 414 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 RDH12Q96NR8 316 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 DCLRE1CQ96SD1 692 aaKnown RBP7.21□□□□□ -1.26
SDF2-204ENST00000587338 MBOAT4Q96T53 435 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 SH3GL3Q99963 347 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 FUZQ9BT04 418 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 BCL2L14Q9BZR8 327 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 EGLN1Q9GZT9 426 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 RNF121Q9H920 327 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 FAM118AQ9NWS6 357 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 DCAF16Q9NXF7 216 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 OR5V1Q9UGF6 321 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 ENOPH1Q9UHY7 261 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 TMEM5Q9Y2B1 443 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 GMPPBQ9Y5P6 360 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 INSIG2Q9Y5U4 225 aa7.21□□□□□ -1.26
SDF2-204ENST00000587338 TRAV36DV7A0A075B6V5 113 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 LOC102725191A0A1B0GVB3 256 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 CLPSL1A2RUU4 121 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 UNC119BA6NIH7 251 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 SLC22A31A6NKX4 558 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 ZNF726A6NNF4 738 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 H0YAE9 185 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 DLGAP1O14490 977 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 FZD7O75084 574 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 CH25HO95992 272 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms