RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 GNB2P62879 340 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 KCNMB1Q16558 191 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 RSPO1Q2MKA7 263 aaPredicted RBP12.08□□□□□ -0.48
SDF2-202ENST00000585428 ZNF404Q494X3 552 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 ZBED5Q49AG3 693 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 MESTQ5EB52 335 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 OR2T2Q6IF00 324 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 C1orf94Q6P1W5 598 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 ZNF841Q6ZN19 808 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 OFCC1Q8IZS5 231 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 OR5AS1Q8N127 324 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 OR5L1Q8NGL2 311 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 OR13C2Q8NGS9 318 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 ACOT11Q8WXI4 607 aaPredicted RBP12.08□□□□□ -0.48
SDF2-202ENST00000585428 RASD2Q96D21 266 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 PLEKHA8Q96JA3 519 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 ZNF582Q96NG8 517 aaPredicted RBP12.08□□□□□ -0.48
SDF2-202ENST00000585428 SLC30A2Q9BRI3 323 aa12.08□□□□□ -0.48
SDF2-202ENST00000585428 NMNAT1Q9HAN9 279 aaPredicted RBP12.08□□□□□ -0.48
SDF2-202ENST00000585428 A0A1B0GUS0 222 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 MDFIC2A0A1B0GVS7 189 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 FAM220BPB1ANY3 271 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 RER1O15258 196 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 MLNRO43193 412 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 HOXA3O43365 443 aaPredicted RBP12.07□□□□□ -0.48
SDF2-202ENST00000585428 RPS2P15880 293 aaKnown RBP12.07□□□□□ -0.48
SDF2-202ENST00000585428 RPL4P36578 427 aaKnown RBP12.07□□□□□ -0.48
SDF2-202ENST00000585428 SRP9P49458 86 aaKnown RBP12.07□□□□□ -0.48
SDF2-202ENST00000585428 RGS6P49758 472 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 BPIFB3P59826 476 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 HIST1H3AP68431 136 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 SRSF4Q08170 494 aaKnown RBP12.07□□□□□ -0.48
SDF2-202ENST00000585428 DEFB112Q30KQ8 113 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 LRRC23Q53EV4 343 aaPredicted RBP12.07□□□□□ -0.48
SDF2-202ENST00000585428 ZNF362Q5T0B9 420 aaPredicted RBP12.07□□□□□ -0.48
SDF2-202ENST00000585428 HIST2H3PS2Q5TEC6 136 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 OTPQ5XKR4 325 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 Q6YL49 198 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 MBOAT2Q6ZWT7 520 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 HIST2H3AQ71DI3 136 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 VTCN1Q7Z7D3 282 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 GLB1L2Q8IW92 636 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 OR2T12Q8NG77 320 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 OR10S1Q8NGN2 331 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 NEIL1Q96FI4 390 aaPredicted RBP12.07□□□□□ -0.48
SDF2-202ENST00000585428 NRIP3Q9NQ35 241 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 PDP1Q9P0J1 537 aaPredicted RBP12.07□□□□□ -0.48
SDF2-202ENST00000585428 ASH2LQ9UBL3 628 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 ATPIF1Q9UII2 106 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 COA3Q9Y2R0 106 aaPredicted RBP12.07□□□□□ -0.48
SDF2-202ENST00000585428 TGP01266 2768 aa12.07□□□□□ -0.48
SDF2-202ENST00000585428 VWFP04275 2813 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 LOC100653049A0A140TA62 436 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 ELOVL7A1L3X0 281 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 FAM181BA6NEQ2 426 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 BBIP1A8MTZ0 92 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 IQCF6A8MYZ5 107 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 SRRM5B3KS81 715 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 XKRYO14609 159 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 IMPA2O14732 288 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 MRASO14807 208 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 SLC16A7O60669 478 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 KHDRBS3O75525 346 aaKnown RBP12.06□□□□□ -0.48
SDF2-202ENST00000585428 KRT34O76011 436 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 GATA4P43694 442 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 KLF10Q13118 480 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 MIDNQ504T8 468 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 FAM201AQ5SY85 155 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 LYPD2Q6UXB3 125 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 ZNF730Q6ZMV8 503 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 COLCA1Q6ZS62 124 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 SPATC1Q76KD6 591 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 TSEN54Q7Z6J9 526 aaKnown RBP12.06□□□□□ -0.48
SDF2-202ENST00000585428 FITM2Q8N6M3 262 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 OR10AD1Q8NGE0 317 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 LZICQ8WZA0 190 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 APOBEC3DQ96AK3 386 aaPredicted RBP12.06□□□□□ -0.48
SDF2-202ENST00000585428 NUDT16L1Q9BRJ7 211 aaKnown RBP12.06□□□□□ -0.48
SDF2-202ENST00000585428 GID8Q9NWU2 228 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 PTTG3PQ9NZH4 202 aa12.06□□□□□ -0.48
SDF2-202ENST00000585428 VSX1Q9NZR4 365 aaPredicted RBP12.06□□□□□ -0.48
SDF2-202ENST00000585428 TRAV40A0A0B4J280 105 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 F5H5P2 479 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 IFNW1P05000 195 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 SDHAP31040 664 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 PSMB10P40306 273 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 RELBQ01201 579 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 MAB21L1Q13394 359 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 BRD3OSQ6XYD6 125 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 MOGAT3Q86VF5 341 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 KIR3DL3Q8N743 410 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 ZNF570Q96NI8 536 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 CITED1Q99966 193 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 TMEM120AQ9BXJ8 343 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 NUAK2Q9H093 628 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 SYT4Q9H2B2 425 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 BEX1Q9HBH7 125 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 NOX4Q9NPH5 578 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 SAR1AQ9NR31 198 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 TMEM100Q9NV29 134 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms