RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 VAMP2P63027 116 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 MRPS34P82930 218 aaKnown RBP6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 PSG4Q00888 419 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 SLC3A1Q07837 685 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 ZNF154Q13106 437 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 BAMBIQ13145 260 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 CYP51A1Q16850 503 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 AGKQ53H12 422 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 FBLN7Q53RD9 439 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 RUNDC3AQ59EK9 446 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 C10orf128Q5T292 105 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 DLEU7Q6UYE1 221 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 GLB1L2Q8IW92 636 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 C11orf65Q8NCR3 313 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 ABHD4Q8TB40 342 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 KLF14Q8TD94 323 aaPredicted RBP6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 NSMAFQ92636 917 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 RAB24Q969Q5 203 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 TAMM41Q96BW9 452 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 SEPHS2Q99611 448 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 PRSS27Q9BQR3 290 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 KRTAP4-5Q9BYR2 181 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 SLC19A3Q9BZV2 496 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 EGLN1Q9GZT9 426 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 KCNN2Q9H2S1 579 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 SIAEQ9HAT2 523 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 INIPQ9NRY2 104 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 C20orf141Q9NUB4 165 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 PLEK2Q9NYT0 353 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 EIF3KQ9UBQ5 218 aaKnown RBP6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 UGT2A1Q9Y4X1 527 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 SOX21Q9Y651 276 aaPredicted RBP6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 AUP1Q9Y679 476 aa6.56□□□□□ -1.36
SMCHD1-210ENST00000583800 WNK1Q9H4A3 2382 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 IGHV3OR16-10A0A075B7F0 116 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 A0A1W2PPH5 198 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 CENPBD1B2RD01 187 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 TIMM8AO60220 97 aaPredicted RBP6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 OR7A10O76100 309 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 TNFRSF6BO95407 300 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 MT-ND1P03886 318 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 RNASE1P07998 156 aaKnown RBP6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 CD55P08174 381 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 FUT1P19526 365 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 DAP3P51398 398 aaKnown RBP6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 SLC18A1P54219 525 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 PPP1CBP62140 327 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 TNFAIP6P98066 277 aaPredicted RBP6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 CD47Q08722 323 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 TOP3AQ13472 1001 aaPredicted RBP6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 TAF11Q15544 211 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 SGCAQ16586 387 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 MIDNQ504T8 468 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 MTX3Q5HYI7 312 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 ARMC4Q5T2S8 1044 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 DHDDSQ86SQ9 333 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 CROCCP2Q86T23 111 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 NKAIN4Q8IVV8 208 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 SPICQ8N5J4 248 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 CLDN22Q8N7P3 220 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 MOSPD2Q8NHP6 518 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 TMEM255BQ8WV15 326 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 C7orf26Q96N11 449 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 GPA33Q99795 319 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 MRI1Q9BV20 369 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 OR2H1Q9GZK4 316 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 WNT5BQ9H1J7 359 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 PATZ1Q9HBE1 687 aaKnown RBP6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 CYSLTR2Q9NS75 346 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 TMEM106BQ9NUM4 274 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 ZDHHC8Q9ULC8 765 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 INSIG2Q9Y5U4 225 aa6.55□□□□□ -1.36
SMCHD1-210ENST00000583800 MDFIC2A0A1B0GVS7 189 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 PGPEP1LA6NFU8 196 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 A8MXK9 166 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 SHOX2O60902 331 aaPredicted RBP6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 TMEM127O75204 238 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 ERLIN1O75477 346 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 GPANK1O95872 356 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 IGHV4-38-2P0DP08 117 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 TNFRSF1BP20333 461 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 MDKP21741 143 aaPredicted RBP6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 OMGP23515 440 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 LAP3P28838 519 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 PCGF2P35227 344 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 LIPAP38571 399 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 CRYBA2P53672 197 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 BTG1P62324 171 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 IL13RA1P78552 427 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 PSG7Q13046 419 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 ZMYND11Q15326 602 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 SLC9A3R2Q15599 337 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 TMEM155Q4W5P6 130 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 ZMAT1Q5H9K5 638 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 ZNF774Q6NX45 483 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 LEG1Q6P5S2 330 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 SLC25A47Q6Q0C1 308 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 UNQ6126/PRO20091Q6UXV3 157 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 Q6ZR03 302 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 HDDC2Q7Z4H3 204 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms