RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 TNS2Q63HR2 1409 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 A0A1W2PQ67 120 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 NCBP2LA6PVI3 153 aaKnown RBP3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 COLCA2A8K830 154 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 H7C417 338 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 K7EMT4 169 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 NVLO15381 856 aaKnown RBP3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 RAD51CO43502 376 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 DNAJB6O75190 326 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 CCNB2O95067 398 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 APCSP02743 223 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 ERCC1P07992 297 aaPredicted RBP3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 ZNF806P0C7X5 589 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 CT45A6P0DMU7 189 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 CT45A5P0DMU8 189 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 CT45A7P0DMV0 189 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 ERGP11308 486 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 ATF6P18850 670 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 CT45A1Q5HYN5 189 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 TMEM220Q6QAJ8 160 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 NPSR1Q6W5P4 371 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 BZW1Q7L1Q6 419 aaKnown RBP3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 SCD5Q86SK9 330 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 NPWQ8N729 165 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 COX18Q8N8Q8 333 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 TTC29Q8NA56 475 aaPredicted RBP3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 CT45A3Q8NHU0 189 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 OR51E1Q8TCB6 317 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 NARS2Q96I59 477 aaKnown RBP3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 GSDMAQ96QA5 445 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 CAMK2N2Q96S95 79 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 BPIFA3Q9BQP9 254 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 MTFP1Q9UDX5 166 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 RFNGQ9Y644 331 aa3.2□□□□□ -1.9
SMARCE1-219ENST00000583294 C7orf66A4D0T2 115 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 SLC9A3R1O14745 358 aaPredicted RBP3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 ZNF207O43670 478 aaKnown RBP3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 HMMRO75330 724 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 LINC00869P0C866 280 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 CSNK2A2P19784 350 aaPredicted RBP3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 STOMP27105 288 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 MRPL19P49406 292 aaKnown RBP3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 SEMG2Q02383 582 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 LY6EQ16553 131 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 TWF2Q6IBS0 349 aaKnown RBP3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 SHISA6Q6ZSJ9 500 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 MBOAT2Q6ZWT7 520 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 SNX20Q7Z614 316 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 WDFY1Q8IWB7 410 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 GABRG1Q8N1C3 465 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 CBR4Q8N4T8 237 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 ZNF615Q8N8J6 731 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 SNX31Q8N9S9 440 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 OR4K5Q8NGD3 323 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 OR9G4Q8NGQ1 327 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 C8orf44Q96CB5 159 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 OR10C1Q96KK4 312 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 ZNF317Q96PQ6 595 aaPredicted RBP3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 XPO6Q96QU8 1125 aaKnown RBP3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 ANKRD60Q9BZ19 345 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 VPS37BQ9H9H4 285 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 CCNB1IP1Q9NPC3 277 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 HYOU1Q9Y4L1 999 aa3.19□□□□□ -1.9
SMARCE1-219ENST00000583294 A0A0U1RQV1 116 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 CDC40O60508 579 aaKnown RBP eCLIP3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 YIF1AO95070 293 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 HMOX2P30519 316 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 SLC11A1P49279 550 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 RPS23P62266 143 aaKnown RBP3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 ILKQ13418 452 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 DGCR6Q14129 220 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 PGGHGQ32M88 737 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 HSDL1Q3SXM5 330 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 COX19Q49B96 90 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 ZNF880Q6PDB4 577 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 FAM71AQ8IYT1 594 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 ESR2Q92731 530 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 PTX4Q96A99 478 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 L3HYPDHQ96EM0 354 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 LINC00477Q96M19 166 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 ZNF488Q96MN9 340 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 HSD17B10Q99714 261 aaKnown RBP3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 C11orf70Q9BRQ4 267 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 UCK2Q9BZX2 261 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 SLC7A5P2Q9GIP4 190 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 OR52D1Q9H346 318 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 SLC38A10Q9HBR0 1119 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 UBN2Q6ZU65 1347 aa3.18□□□□□ -1.9
SMARCE1-219ENST00000583294 PLA2R1Q13018 1463 aa3.17□□□□□ -1.9
SMARCE1-219ENST00000583294 INSRP06213 1382 aa3.17□□□□□ -1.9
SMARCE1-219ENST00000583294 TRAV19A0A0A6YYK7 116 aa3.17□□□□□ -1.9
SMARCE1-219ENST00000583294 H7C1H1 209 aa3.17□□□□□ -1.9
SMARCE1-219ENST00000583294 CCNKO75909 580 aa3.17□□□□□ -1.9
SMARCE1-219ENST00000583294 LSM8O95777 96 aaKnown RBP3.17□□□□□ -1.9
SMARCE1-219ENST00000583294 CD160O95971 181 aa3.17□□□□□ -1.9
SMARCE1-219ENST00000583294 CTSLP07711 333 aa3.17□□□□□ -1.9
SMARCE1-219ENST00000583294 RAB7AP51149 207 aa3.17□□□□□ -1.9
SMARCE1-219ENST00000583294 IFT88Q13099 833 aa3.17□□□□□ -1.9
SMARCE1-219ENST00000583294 TCEAL5Q5H9L2 206 aa3.17□□□□□ -1.9
SMARCE1-219ENST00000583294 AVPI1Q5T686 147 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms