RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 LRRN1Q6UXK5 716 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 LINGO2Q7L985 606 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 C17orf78Q8N4C9 275 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 OR1K1Q8NGR3 316 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 LILRB4Q8NHJ6 448 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 SSC4DQ8WTU2 575 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 THRSPQ92748 146 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 YIPF6Q96EC8 236 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 ZNF837Q96EG3 531 aaPredicted RBP12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 PELI1Q96FA3 418 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 ATF6BQ99941 703 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 FUNDC2Q9BWH2 189 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 TTTY10Q9BZA0 68 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 MOB1AQ9H8S9 216 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 OBP2BQ9NPH6 170 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 NDUFB11Q9NX14 153 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 SLCO1C1Q9NYB5 712 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 RSL24D1Q9UHA3 163 aaKnown RBP12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 MRM2Q9UI43 246 aaKnown RBP12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 ATPIF1Q9UII2 106 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 SSR3Q9UNL2 185 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 GSTK1Q9Y2Q3 226 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 KLHDC2Q9Y2U9 406 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 LRP12Q9Y561 859 aa12.2□□□□□ -0.46
CSNK1D-209ENST00000578904 PCNX1Q96RV3 2341 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 NKX2-6A6NCS4 301 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 ACOD1A6NK06 481 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 TMEM212A6NML5 194 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 OGG1O15527 345 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 RPP14O95059 124 aaKnown RBP12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 HLA-DPB1P04440 258 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 RNF224P0DH78 156 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 GALP22466 123 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 LIPAP38571 399 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 OPRL1P41146 370 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 ASCL1P50553 236 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 HIST1H3AP68431 136 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 ALKBH1Q13686 389 aaKnown RBP12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 CDK5R1Q15078 307 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 HIST2H3PS2Q5TEC6 136 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 C9orf135Q5VTT2 229 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 FDX2Q6P4F2 183 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 PAMR1Q6UXH9 720 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 HIST2H3AQ71DI3 136 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 PHC2Q8IXK0 858 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 ZNF610Q8N9Z0 462 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 SMIM19Q96E16 107 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 LRRC46Q96FV0 321 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 MAP6Q96JE9 813 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 KCNJ15Q99712 375 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 SH3GL3Q99963 347 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 DDX28Q9NUL7 540 aaKnown RBP12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 ACOXLQ9NUZ1 547 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 STUB1Q9UNE7 303 aa12.19□□□□□ -0.46
CSNK1D-209ENST00000578904 IQCMA0A1B0GVH7 501 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 OR6C6A6NF89 314 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 LOC110117498-PIK3R3F6TDL0 507 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 PSMD9O00233 223 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 RER1O15258 196 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 AIREO43918 545 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 DOK2O60496 412 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 ABHD16AO95870 558 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 WNT11O96014 354 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 ITGA5P08648 1049 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 COX5BP10606 129 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 ZNF32P17041 273 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 COX5AP20674 150 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 CD79BP40259 229 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 CCR9P51686 369 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 TPTEP56180 551 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 CDSNQ15517 529 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 ARL9Q6T311 187 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 CFAP77Q6ZQR2 320 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 SPATC1Q76KD6 591 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 SKA3Q8IX90 412 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 RFLNBQ8N5W9 214 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 ZNF433Q8N7K0 673 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 BCL2L2Q92843 193 aaPredicted RBP12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 FBXO17Q96EF6 278 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 BOD1Q96IK1 185 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 KCNJ16Q9NPI9 418 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 ELOVL5Q9NYP7 299 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 ENPP5Q9UJA9 477 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 R4GMQ9 66 aa12.18□□□□□ -0.46
CSNK1D-209ENST00000578904 HECTD1Q9ULT8 2610 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 A0A096LPE4 126 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 TMEM269A0A1B0GVZ9 245 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 A0A1W2PPZ6 126 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 CLEC18AA5D8T8 446 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 WIPF3A6NGB9 483 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 A8MXE2 369 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 H3BSA7 217 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 SLC22A1O15245 554 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 CD79AP11912 226 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 IGHV1-2P23083 117 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 IL32P24001 234 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 GDI2P50395 445 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 MMP16P51512 607 aa12.17□□□□□ -0.46
CSNK1D-209ENST00000578904 SLC3A1Q07837 685 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms