RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 FCGR1AP12314 374 aa20.08■□□□□ 0.81
SNF8-217ENST00000576353 SPI1P17947 270 aa20.08■□□□□ 0.81
SNF8-217ENST00000576353 GIFP27352 417 aa20.08■□□□□ 0.81
SNF8-217ENST00000576353 HIPK1Q86Z02 1210 aa20.08■□□□□ 0.81
SNF8-217ENST00000576353 ZNRF4Q8WWF5 429 aa20.08■□□□□ 0.81
SNF8-217ENST00000576353 CGGBP1Q9UFW8 167 aaPredicted RBP20.08■□□□□ 0.81
SNF8-217ENST00000576353 CSPG4Q6UVK1 2322 aa20.07■□□□□ 0.8
SNF8-217ENST00000576353 TVP23AA6NH52 213 aa20.07■□□□□ 0.8
SNF8-217ENST00000576353 GYPBP06028 91 aa20.07■□□□□ 0.8
SNF8-217ENST00000576353 DBHP09172 617 aa20.07■□□□□ 0.8
SNF8-217ENST00000576353 PAICSP22234 425 aaKnown RBP20.07■□□□□ 0.8
SNF8-217ENST00000576353 MRPS11P82912 194 aaKnown RBP20.07■□□□□ 0.8
SNF8-217ENST00000576353 ACSM5Q6NUN0 579 aa20.07■□□□□ 0.8
SNF8-217ENST00000576353 FAHD1Q6P587 224 aa20.07■□□□□ 0.8
SNF8-217ENST00000576353 CFAP77Q6ZQR2 320 aa20.07■□□□□ 0.8
SNF8-217ENST00000576353 OR5L1Q8NGL2 311 aa20.07■□□□□ 0.8
SNF8-217ENST00000576353 RDH5Q92781 318 aa20.07■□□□□ 0.8
SNF8-217ENST00000576353 APOBEC3DQ96AK3 386 aaPredicted RBP20.07■□□□□ 0.8
SNF8-217ENST00000576353 ATF6BQ99941 703 aa20.07■□□□□ 0.8
SNF8-217ENST00000576353 PAPOLBQ9NRJ5 636 aaKnown RBP20.07■□□□□ 0.8
SNF8-217ENST00000576353 STARD10Q9Y365 291 aa20.07■□□□□ 0.8
SNF8-217ENST00000576353 SETD2Q9BYW2 2564 aaPredicted RBP20.07■□□□□ 0.8
SNF8-217ENST00000576353 HPXP02790 462 aa20.06■□□□□ 0.8
SNF8-217ENST00000576353 ZNF81P51508 661 aa20.06■□□□□ 0.8
SNF8-217ENST00000576353 MMP15P51511 669 aa20.06■□□□□ 0.8
SNF8-217ENST00000576353 CDK5Q00535 292 aa20.06■□□□□ 0.8
SNF8-217ENST00000576353 GGTLC2Q14390 218 aa20.06■□□□□ 0.8
SNF8-217ENST00000576353 ZMAT1Q5H9K5 638 aa20.06■□□□□ 0.8
SNF8-217ENST00000576353 OR6K6Q8NGW6 343 aa20.06■□□□□ 0.8
SNF8-217ENST00000576353 PTP4A1Q93096 173 aa20.06■□□□□ 0.8
SNF8-217ENST00000576353 OTULINQ96BN8 352 aa20.06■□□□□ 0.8
SNF8-217ENST00000576353 BPESC1Q9GZL8 116 aa20.06■□□□□ 0.8
SNF8-217ENST00000576353 COMMD3-BMI1R4GMX3 469 aa20.06■□□□□ 0.8
SNF8-217ENST00000576353 FAM183AA6NL82 134 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 G3V2T6 193 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 TIMM8AO60220 97 aaPredicted RBP20.05■□□□□ 0.8
SNF8-217ENST00000576353 MAGEB1P43366 347 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 ENTPD1P49961 510 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 KRTAP1-1Q07627 177 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 PSG7Q13046 419 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 TMEM249Q2WGJ8 235 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 TEX30Q5JUR7 227 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 ZDHHC13Q8IUH4 622 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 PARP8Q8N3A8 854 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 ZNF511Q8NB15 262 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 CMBLQ96DG6 245 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 WDR76Q9H967 626 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 CHODLQ9H9P2 273 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 DECR2Q9NUI1 292 aa20.05■□□□□ 0.8
SNF8-217ENST00000576353 PRR23D1E9PI22 279 aaPredicted RBP20.04■□□□□ 0.8
SNF8-217ENST00000576353 LYNX1G3V0Z9 82 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 ZNF593O00488 134 aaPredicted RBP20.04■□□□□ 0.8
SNF8-217ENST00000576353 SURF4O15260 269 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 PRR23D2P0DMB1 279 aaPredicted RBP20.04■□□□□ 0.8
SNF8-217ENST00000576353 LYNX1P0DP58 116 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 CLUP10909 449 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 ACHEP22303 614 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 CCL8P80075 99 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 RIN1Q13671 783 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 PCK2Q16822 640 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 RSPO1Q2MKA7 263 aaPredicted RBP20.04■□□□□ 0.8
SNF8-217ENST00000576353 KRTAP27-1Q3LI81 207 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 SPTSSAQ969W0 71 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 HAVCR1Q96D42 359 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 PLEKHA8Q96JA3 519 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 MAP6Q96JE9 813 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 DIRC2Q96SL1 478 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 MED20Q9H944 212 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 SLC25A19Q9HC21 320 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 PNRC2Q9NPJ4 139 aaKnown RBP20.04■□□□□ 0.8
SNF8-217ENST00000576353 ZDHHC8Q9ULC8 765 aa20.04■□□□□ 0.8
SNF8-217ENST00000576353 F5H5K5 113 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 TPD52L2O43399 206 aaKnown RBP20.03■□□□□ 0.8
SNF8-217ENST00000576353 CD5LO43866 347 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 NCR1O76036 304 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 SPARCP09486 303 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 RAC2P15153 192 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 ZNF23P17027 643 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 KITLGP21583 273 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 COL8A2P25067 703 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 DAPP51397 102 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 CRISP1P54107 249 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 TPTEP56180 551 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 TMEM33P57088 247 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 TMEM255AQ5JRV8 349 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 FAM209AQ5JX71 171 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 LINC01590Q5TEZ4 76 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 LYPD4Q6UWN0 246 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 DCXRQ7Z4W1 244 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 HCAR1Q9BXC0 346 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 POFUT1Q9H488 388 aa20.03■□□□□ 0.8
SNF8-217ENST00000576353 PURGQ9UJV8 347 aaKnown RBP20.03■□□□□ 0.8
SNF8-217ENST00000576353 SPRY3O43610 288 aa20.02■□□□□ 0.8
SNF8-217ENST00000576353 TLX2O43763 284 aaPredicted RBP20.02■□□□□ 0.8
SNF8-217ENST00000576353 GLCEO94923 617 aa20.02■□□□□ 0.8
SNF8-217ENST00000576353 ADH4P08319 380 aa20.02■□□□□ 0.8
SNF8-217ENST00000576353 ACSM4P0C7M7 580 aa20.02■□□□□ 0.8
SNF8-217ENST00000576353 GSTT1P30711 240 aa20.02■□□□□ 0.8
SNF8-217ENST00000576353 RPS27P42677 84 aaKnown RBP20.02■□□□□ 0.8
SNF8-217ENST00000576353 ESRRGP62508 458 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms