RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 CCDC3Q9BQI4 270 aa13.07□□□□□ -0.32
SCARF1-209ENST00000576012 MRI1Q9BV20 369 aa13.07□□□□□ -0.32
SCARF1-209ENST00000576012 C1orf198Q9H425 327 aa13.07□□□□□ -0.32
SCARF1-209ENST00000576012 SDHAF3Q9NRP4 125 aa13.07□□□□□ -0.32
SCARF1-209ENST00000576012 KIF26BQ2KJY2 2108 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 SDCBPO00560 298 aaPredicted RBP13.06□□□□□ -0.32
SCARF1-209ENST00000576012 YIF1AO95070 293 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 OR8U9P0C7N5 309 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 GLI4P10075 376 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 LAG3P18627 525 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 SKP2Q13309 424 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 ZNF345Q14585 488 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 ZNF542PQ5EBM4 170 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 OR8U1Q8NH10 309 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 TSPAN32Q96QS1 320 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 ZNF426Q9BUY5 554 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 RNF126Q9BV68 326 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 SPACA6W5XKT8 324 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 NME2P1O60361 137 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 WISP1O95388 367 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 SCGB1D2O95969 90 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 CD74P04233 296 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 RNF224P0DH78 156 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 CSRP1P21291 193 aaKnown RBP13.06□□□□□ -0.32
SCARF1-209ENST00000576012 RPS15AP62244 130 aaKnown RBP13.06□□□□□ -0.32
SCARF1-209ENST00000576012 BTG2P78543 158 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 ZNF124Q15973 351 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 MST1LQ2TV78 715 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 TMEM52BQ4KMG9 183 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 CDC20BQ86Y33 519 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 TMEM229BQ8NBD8 167 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 AKR7LQ8NHP1 331 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 HIST1H2BAQ96A08 127 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 MRGPRFQ96AM1 343 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 PHYHIPLQ96FC7 376 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 JSRP1Q96MG2 331 aaPredicted RBP13.06□□□□□ -0.32
SCARF1-209ENST00000576012 SEC11CQ9BY50 192 aa13.06□□□□□ -0.32
SCARF1-209ENST00000576012 EML5Q05BV3 1969 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 IGKV1D-42A0A075B6H8 117 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 TRBV5-7A0A0A0MS05 114 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 A0A1W2PQU0 124 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 ADH1CP00326 375 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 KNG1P01042 644 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 CD2P06729 351 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 SLC25A4P12235 298 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 HOXB1P14653 301 aaPredicted RBP13.05□□□□□ -0.32
SCARF1-209ENST00000576012 ZP2Q05996 745 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 CD226Q15762 336 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 SLC35D3Q5M8T2 416 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.05□□□□□ -0.32
SCARF1-209ENST00000576012 RNF144BQ7Z419 303 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 MCHR2Q969V1 340 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 MMP26Q9NRE1 261 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 SMCO4Q9NRQ5 59 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.05□□□□□ -0.32
SCARF1-209ENST00000576012 ST8SIA5O15466 376 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 CLN5O75503 358 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 TSFMP43897 325 aaKnown RBP13.05□□□□□ -0.32
SCARF1-209ENST00000576012 DCDP81605 110 aaKnown RBP13.05□□□□□ -0.32
SCARF1-209ENST00000576012 ANKRD39Q53RE8 183 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 TMEM104Q8NE00 496 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 EIF5A2Q9GZV4 153 aaKnown RBP13.05□□□□□ -0.32
SCARF1-209ENST00000576012 ALX4Q9H161 411 aaPredicted RBP13.05□□□□□ -0.32
SCARF1-209ENST00000576012 ZBP1Q9H171 429 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.05□□□□□ -0.32
SCARF1-209ENST00000576012 P2RY10O00398 339 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 XKRYO14609 159 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 RENP00797 406 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 MYOGP15173 224 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 FHITP49789 147 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 PRPS1P60891 318 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 RAB32Q13637 225 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 CHRDL2Q6WN34 429 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 ZNF550Q7Z398 422 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 WBP1LQ9NX94 342 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 LPAR3Q9UBY5 353 aa13.05□□□□□ -0.32
SCARF1-209ENST00000576012 CARHSP1Q9Y2V2 147 aaKnown RBP13.05□□□□□ -0.32
SCARF1-209ENST00000576012 A0A1W2PPE2 198 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 EFCAB7A8K855 629 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 ARPC3O15145 178 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 MAOAP21397 527 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 CTNNB1P35222 781 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 RELQ04864 619 aaPredicted RBP13.04□□□□□ -0.32
SCARF1-209ENST00000576012 MGAT2Q10469 447 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 PTCRAQ6ISU1 281 aaPredicted RBP13.04□□□□□ -0.32
SCARF1-209ENST00000576012 NPSR1Q6W5P4 371 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 ZNF595Q8IYB9 648 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 ZNF101Q8IZC7 436 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 VWCEQ96DN2 955 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 RAB33BQ9H082 229 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 CYTL1Q9NRR1 136 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 ARHGEF17Q96PE2 2063 aaPredicted RBP13.04□□□□□ -0.32
SCARF1-209ENST00000576012 LILRB3O75022 631 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 C1QL1O75973 258 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 FAM157CP0CG43 387 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 NUBP1P53384 320 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 DMWDQ09019 674 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 RASGEF1BQ0VAM2 473 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 OR2A2Q6IF42 318 aa13.04□□□□□ -0.32
SCARF1-209ENST00000576012 Q6ZRG5 221 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms