RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 CDH20Q9HBT6 801 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 RAB26Q9ULW5 256 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 EXOGQ9Y2C4 368 aaKnown RBP7.41□□□□□ -1.22
NUP88-211ENST00000575976 ATP23Q9Y6H3 246 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 CELSR1Q9NYQ6 3014 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 DNHD1Q96M86 4753 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 PDZD2O15018 2839 aa7.41□□□□□ -1.22
NUP88-211ENST00000575976 ABCA2Q9BZC7 2435 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 PRR32B1ATL7 298 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 ZNF878C9JN71 531 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 E7EQL1 145 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 ZNF670-ZNF695F2Z2N8 137 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 F5H5K5 113 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 PSMD9O00233 223 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 MAGEB4O15481 346 aaPredicted RBP7.4□□□□□ -1.22
NUP88-211ENST00000575976 OR2T7P0C7T2 308 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 PRF1P14222 555 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 MYF6P23409 242 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 SSTR2P30874 369 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 WNT5AP41221 380 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 GALK2Q01415 458 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 TAF13Q15543 124 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 KRTAP27-1Q3LI81 207 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 KRT80Q6KB66 452 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 SSX6Q7RTT6 188 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 NAA40Q86UY6 237 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 TMEM200AQ86VY9 491 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 RFLNBQ8N5W9 214 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 OR52I1Q8NGK6 324 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 OR2T27Q8NH04 317 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 RNF133Q8WVZ7 376 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 AKAP1Q92667 903 aaKnown RBP eCLIP7.4□□□□□ -1.22
NUP88-211ENST00000575976 LGALS12Q96DT0 336 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 CNBD2Q96M20 576 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 MNTQ99583 582 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 ZNF184Q99676 751 aaPredicted RBP7.4□□□□□ -1.22
NUP88-211ENST00000575976 KCNJ15Q99712 375 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 ATF6BQ99941 703 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 CLEC4MQ9H2X3 399 aaPredicted RBP7.4□□□□□ -1.22
NUP88-211ENST00000575976 OR51B6Q9H340 312 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 DDX28Q9NUL7 540 aaKnown RBP7.4□□□□□ -1.22
NUP88-211ENST00000575976 MRPS18AQ9NVS2 196 aaKnown RBP7.4□□□□□ -1.22
NUP88-211ENST00000575976 SLCO1C1Q9NYB5 712 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 ATPIF1Q9UII2 106 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 LAMP5Q9UJQ1 280 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 POU2F3Q9UKI9 436 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 GRIP1Q9Y3R0 1128 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 RPL36Q9Y3U8 105 aaKnown RBP7.4□□□□□ -1.22
NUP88-211ENST00000575976 TMEM14AQ9Y6G1 99 aa7.4□□□□□ -1.22
NUP88-211ENST00000575976 HIVEP1P15822 2718 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 A0A1W2PQL4 384 aaPredicted RBP7.39□□□□□ -1.23
NUP88-211ENST00000575976 J3QRE1 110 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 XPNPEP2O43895 674 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 SMPD2O60906 423 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 H2BFMP0C1H6 154 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 ACSM4P0C7M7 580 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 FAM157BP0CG42 384 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 NR4A1P22736 598 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 OPRL1P41146 370 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 SLC15A1P46059 708 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 PRKXP51817 358 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 UCP2P55851 309 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 KRTAP10-9P60411 292 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 CXCR4P61073 352 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 NKX6-1P78426 367 aaPredicted RBP7.39□□□□□ -1.23
NUP88-211ENST00000575976 ZNF85Q03923 595 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 ECH1Q13011 328 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 SNTB2Q13425 540 aaKnown RBP7.39□□□□□ -1.23
NUP88-211ENST00000575976 ZNF672Q499Z4 452 aaPredicted RBP7.39□□□□□ -1.23
NUP88-211ENST00000575976 C6orf141Q5SZD1 244 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 KCTD18Q6PI47 426 aaPredicted RBP7.39□□□□□ -1.23
NUP88-211ENST00000575976 VHLLQ6RSH7 139 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 LRRN1Q6UXK5 716 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 KRT77Q7Z794 578 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 NUP37Q8NFH4 326 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 BPIFB6Q8NFQ5 453 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 OR10H4Q8NGA5 316 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 GGHQ92820 318 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 C4orf45Q96LM5 186 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 OR8B4Q96RC9 309 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 DCLRE1CQ96SD1 692 aaKnown RBP7.39□□□□□ -1.23
NUP88-211ENST00000575976 RHNO1Q9BSD3 238 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 COPS4Q9BT78 406 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 PLEKHF2Q9H8W4 249 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 PLCXD1Q9NUJ7 323 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 CISD1Q9NZ45 108 aaKnown RBP7.39□□□□□ -1.23
NUP88-211ENST00000575976 EIF3KQ9UBQ5 218 aaKnown RBP7.39□□□□□ -1.23
NUP88-211ENST00000575976 MYRFQ9Y2G1 1151 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 PCDHGB5Q9Y5G0 923 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 SPG11Q96JI7 2443 aa7.39□□□□□ -1.23
NUP88-211ENST00000575976 M0R135 149 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 SLC1A7O00341 560 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 HS3ST1O14792 307 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 PHYHO14832 338 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 DENRO43583 198 aaKnown RBP7.38□□□□□ -1.23
NUP88-211ENST00000575976 GPRIN2O60269 458 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 FAM20BO75063 409 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 FADS2O95864 444 aaKnown RBP7.38□□□□□ -1.23
NUP88-211ENST00000575976 ABHD16AO95870 558 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 NGFP01138 241 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms