RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 WNT5BQ9H1J7 359 aa21■□□□□ 0.95
ATPAF1-213ENST00000574428 SIRT4Q9Y6E7 314 aaPredicted RBP21■□□□□ 0.95
ATPAF1-213ENST00000574428 A0A1W2PR80 420 aa20.99■□□□□ 0.95
ATPAF1-213ENST00000574428 DOK2O60496 412 aa20.99■□□□□ 0.95
ATPAF1-213ENST00000574428 RIDAP52758 137 aaKnown RBP20.99■□□□□ 0.95
ATPAF1-213ENST00000574428 RAB35Q15286 201 aa20.99■□□□□ 0.95
ATPAF1-213ENST00000574428 TAF13Q15543 124 aa20.99■□□□□ 0.95
ATPAF1-213ENST00000574428 STAC2Q6ZMT1 411 aa20.99■□□□□ 0.95
ATPAF1-213ENST00000574428 BHLHA15Q7RTS1 189 aaPredicted RBP20.99■□□□□ 0.95
ATPAF1-213ENST00000574428 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.99■□□□□ 0.95
ATPAF1-213ENST00000574428 ATF6BQ99941 703 aa20.99■□□□□ 0.95
ATPAF1-213ENST00000574428 DDX28Q9NUL7 540 aaKnown RBP20.99■□□□□ 0.95
ATPAF1-213ENST00000574428 JKAMPQ9P055 326 aa20.99■□□□□ 0.95
ATPAF1-213ENST00000574428 CD36P16671 472 aa20.98■□□□□ 0.95
ATPAF1-213ENST00000574428 ACSM1Q08AH1 577 aa20.98■□□□□ 0.95
ATPAF1-213ENST00000574428 PABPC1L2AQ5JQF8 200 aa20.98■□□□□ 0.95
ATPAF1-213ENST00000574428 LIPKQ5VXJ0 399 aa20.98■□□□□ 0.95
ATPAF1-213ENST00000574428 DEGS2Q6QHC5 323 aa20.98■□□□□ 0.95
ATPAF1-213ENST00000574428 BCL7BQ9BQE9 202 aa20.98■□□□□ 0.95
ATPAF1-213ENST00000574428 ISYNA1Q9NPH2 558 aa20.98■□□□□ 0.95
ATPAF1-213ENST00000574428 ZNF254O75437 659 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 UBL3O95164 117 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 SPCS2Q15005 226 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 ZFAND2BQ8WV99 257 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 SLC7A6Q92536 515 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 WACQ9BTA9 647 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 A0A1B0GUH1 482 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 SYNGR3O43761 229 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 CELP19835 753 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 IL32P24001 234 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 HSD11B1P28845 292 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 RGS6P49758 472 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 UBE2NP61088 152 aaKnown RBP20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 RAB1AP62820 205 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 BDH1Q02338 343 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 MFGE8Q08431 387 aaPredicted RBP20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 FAM27E3Q08E93 113 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 SSX1Q16384 188 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 MYO7BQ6PIF6 2116 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 RHOUQ7L0Q8 258 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 NANOS1Q8WY41 292 aaKnown RBP20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 UFD1Q92890 307 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 HDHD2Q9H0R4 259 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 SLC17A5Q9NRA2 495 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 B3GNT2Q9NY97 397 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 ST6GALNAC2Q9UJ37 374 aa20.97■□□□□ 0.95
ATPAF1-213ENST00000574428 CPEP16870 476 aa20.96■□□□□ 0.95
ATPAF1-213ENST00000574428 CHRNB4P30926 498 aa20.96■□□□□ 0.95
ATPAF1-213ENST00000574428 HOXC12P31275 282 aa20.96■□□□□ 0.95
ATPAF1-213ENST00000574428 ARR3P36575 388 aa20.96■□□□□ 0.95
ATPAF1-213ENST00000574428 NANOS3P60323 173 aaKnown RBP20.96■□□□□ 0.95
ATPAF1-213ENST00000574428 GALK2Q01415 458 aa20.96■□□□□ 0.95
ATPAF1-213ENST00000574428 GSG1Q2KHT4 349 aa20.96■□□□□ 0.95
ATPAF1-213ENST00000574428 TMEM53Q6P2H8 277 aa20.96■□□□□ 0.95
ATPAF1-213ENST00000574428 MDP1Q86V88 176 aa20.96■□□□□ 0.95
ATPAF1-213ENST00000574428 EGFL6Q8IUX8 553 aa20.96■□□□□ 0.95
ATPAF1-213ENST00000574428 CPEB3Q8NE35 698 aaKnown RBP20.96■□□□□ 0.95
ATPAF1-213ENST00000574428 OR1F12Q8NHA8 337 aa20.96■□□□□ 0.95
ATPAF1-213ENST00000574428 BOD1Q96IK1 185 aa20.96■□□□□ 0.95
ATPAF1-213ENST00000574428 COQ3Q9NZJ6 369 aa20.96■□□□□ 0.95
ATPAF1-213ENST00000574428 OR6C6A6NF89 314 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 PNPP00491 289 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 DBHP09172 617 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 ZNF182P17025 639 aaPredicted RBP20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 HTR5AP47898 357 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 PRKXP51817 358 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 TAS2R43P59537 309 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 ARL9Q6T311 187 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 PHC2Q8IXK0 858 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 WDR31Q8NA23 367 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 RELNP78509 3460 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 CCRL2O00421 344 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 PSMB1P20618 241 aaKnown RBP20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 GRB2P62993 217 aaKnown RBP20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 TPBGQ13641 420 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 C4orf17Q53FE4 359 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 DPPA2Q7Z7J5 298 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 C17orf78Q8N4C9 275 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 S100PBPQ96BU1 408 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 BRD7Q9NPI1 651 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 GTF2A1LQ9UNN4 478 aa20.95■□□□□ 0.94
ATPAF1-213ENST00000574428 ARPC4-TTLL3A0A0A6YYG9 625 aa20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 OR5H1A6NKK0 313 aa20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 F5H5K5 113 aa20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 SRSF10O75494 262 aaKnown RBP20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 TGM4P49221 684 aa20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 LSM3P62310 102 aaKnown RBP20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 SLC3A1Q07837 685 aa20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 CDK5R1Q15078 307 aa20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 RSPO1Q2MKA7 263 aaPredicted RBP20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 CCDC58Q4VC31 144 aa20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 RPL22L1Q6P5R6 122 aaKnown RBP20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 CCDC36Q8IYA8 594 aa20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 RPL3LQ92901 407 aaKnown RBP20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 KCNJ15Q99712 375 aa20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 ELOVL5Q9NYP7 299 aa20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 FRRS1LQ9P0K9 344 aa20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 ERRFI1Q9UJM3 462 aaPredicted RBP20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 R4GMQ9 66 aa20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 ESPL1Q14674 2120 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms