RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	AHSA2	Q719I0	299 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	SHF	Q7M4L6	423 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	SLC16A9	Q7RTY1	509 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	TIGD4	Q8IY51	512 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	ACBD7	Q8N6N7	88 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	ZNF511	Q8NB15	262 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	SLC26A10	Q8NG04	563 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	TSPAN14	Q8NG11	270 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	OR4F15	Q8NGB8	312 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	OR52I1	Q8NGK6	324 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	OR2T27	Q8NH04	317 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	NSMAF	Q92636	917 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	INTS14	Q96SY0	518 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	CNN2	Q99439	309 aa	Known RBP	12.46	□□□□□ -0.41
ABR-223	ENST00000573895	FOXB1	Q99853	325 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	KCNS3	Q9BQ31	491 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	WAC	Q9BTA9	647 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	JAM3	Q9BX67	310 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	CDCA4	Q9BXL8	241 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	ADGRL4	Q9HBW9	690 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	CHCHD3	Q9NX63	227 aa	Known RBP	12.46	□□□□□ -0.41
ABR-223	ENST00000573895	B3GNT2	Q9NY97	397 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	TMEM14A	Q9Y6G1	99 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	ATP23	Q9Y6H3	246 aa		12.46	□□□□□ -0.41
ABR-223	ENST00000573895	IGKV1D-43	A0A0B4J1Z2	117 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	ATP6V1G2-DDX39B	F2Z307	99 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895		H7C417	338 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895		J3QRE1	110 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	CECR9	P0C854	216 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	CDKN1A	P38936	164 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	LSM6	P62312	80 aa	Known RBP	12.45	□□□□□ -0.42
ABR-223	ENST00000573895	ZNF773	Q6PK81	442 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	ZNF813	Q6ZN06	617 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	ZNF454	Q8N9F8	522 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	NUP37	Q8NFH4	326 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	OR10H5	Q8NGA6	315 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	OR51G2	Q8NGK0	314 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	NANOS1	Q8WY41	292 aa	Known RBP	12.45	□□□□□ -0.42
ABR-223	ENST00000573895	MRPL48	Q96GC5	212 aa	Known RBP	12.45	□□□□□ -0.42
ABR-223	ENST00000573895	SEC61A2	Q9H9S3	476 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	SIAE	Q9HAT2	523 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	12.45	□□□□□ -0.42
ABR-223	ENST00000573895	ERVK-18	Q9QC07	812 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	FBXL3	Q9UKT7	428 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	EXOSC1	Q9Y3B2	195 aa	Known RBP	12.45	□□□□□ -0.42
ABR-223	ENST00000573895	UGT2A1	Q9Y4X1	527 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895	SNX5	Q9Y5X3	404 aa		12.45	□□□□□ -0.42
ABR-223	ENST00000573895		A0A1W2PPL8	197 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	ZNF593	O00488	134 aa	Predicted RBP	12.44	□□□□□ -0.42
ABR-223	ENST00000573895	PHYH	O14832	338 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	IGHV4-39	P01824	125 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	IGHA1	P01876	353 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	TF	P02787	698 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	GAA	P10253	952 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	MYL12A	P19105	171 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	MSR1	P21757	451 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	ENTPD1	P49961	510 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	TUBA1B	P68363	451 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	TUBA4A	P68366	448 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	PCK2	Q16822	640 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	FAM27B	Q5VT28	67 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	DNM1P46	Q6ZS02	220 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	TUBA1A	Q71U36	451 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	ERI1	Q8IV48	349 aa	Known RBP	12.44	□□□□□ -0.42
ABR-223	ENST00000573895	SLC35F2	Q8IXU6	374 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	SVOP	Q8N4V2	548 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	SIGLEC11	Q96RL6	698 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	CDADC1	Q9BWV3	514 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	WDR76	Q9H967	626 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	POLE4	Q9NR33	117 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	CA10	Q9NS85	328 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	TMEM38B	Q9NVV0	291 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	MRPL22	Q9NWU5	206 aa	Known RBP	12.44	□□□□□ -0.42
ABR-223	ENST00000573895	FBXO9	Q9UK97	447 aa	Predicted RBP	12.44	□□□□□ -0.42
ABR-223	ENST00000573895	PMF1-BGLAP	U3KQ54	211 aa		12.44	□□□□□ -0.42
ABR-223	ENST00000573895	DAPL1	A0PJW8	107 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	ZNF503-AS2	A6NEH8	195 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	TVP23A	A6NH52	213 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	TRIM64C	A6NLI5	447 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	ZNF670-ZNF695	F2Z2N8	137 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895		H7C1Q1	480 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	UBL3	O95164	117 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	OR8G3P	P0DMU2	310 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	CAPZA2	P47755	286 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	SGCA	Q16586	387 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	SWI5	Q1ZZU3	235 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	CLEC12B	Q2HXU8	276 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	GSG1	Q2KHT4	349 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	DPPA2	Q7Z7J5	298 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	MDP1	Q86V88	176 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	ASB17	Q8WXJ9	295 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	C11orf40	Q8WZ69	217 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	ZNF75A	Q96N20	296 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	CACNG6	Q9BXT2	260 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	CCDC90B	Q9GZT6	254 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	KCNN2	Q9H2S1	579 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	ZNF442	Q9H7R0	627 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	ZNF224	Q9NZL3	707 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	SCOC	Q9UIL1	159 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	ERGIC3	Q9Y282	383 aa		12.43	□□□□□ -0.42

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