RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 FMODQ06828 376 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 PLCXD2Q0VAA5 305 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 ZNF260Q3ZCT1 412 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 FAM74A3Q4VXF1 159 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 OR52W1Q6IF63 320 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 LYG2Q86SG7 212 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 PDE7BQ9NP56 450 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 MMACHCQ9Y4U1 282 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 SPEGQ15772 3267 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 A0A1W2PQD3 144 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 TMEM200CA6NKL6 621 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 RAB27BO00194 218 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 P2RY10O00398 339 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 IGHMP01871 453 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 BLKP51451 505 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 CCR5P51681 352 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 RNASE10Q5GAN6 216 aaKnown RBP17.05■□□□□ 0.32
SCARF1-206ENST00000573852 ACOT7LQ6ZUV0 252 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 TRAPPC6BQ86SZ2 158 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 BOLLQ8N9W6 283 aaKnown RBP17.05■□□□□ 0.32
SCARF1-206ENST00000573852 KLHDC7BQ96G42 594 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 MMP17Q9ULZ9 603 aa17.05■□□□□ 0.32
SCARF1-206ENST00000573852 SOX1O00570 391 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-206ENST00000573852 ISG15P05161 165 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 GP1BAP07359 652 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 IL32P24001 234 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 CRABP1P29762 137 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 FASLGP48023 281 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 MEF2DQ14814 521 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 PRAMEF17Q5VTA0 474 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 HLA-DQA1Q5Y7H0 255 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 RHOUQ7L0Q8 258 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 PAQR4Q8N4S7 273 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-206ENST00000573852 TMEM185AQ8NFB2 350 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 SLC26A10Q8NG04 563 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 ST7LQ8TDW4 575 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 PTX4Q96A99 478 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 CNTD2Q9H8S5 307 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 CUTCQ9NTM9 273 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 SLC2A8Q9NY64 477 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 MYO15AQ9UKN7 3530 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 TMEM269A0A1B0GVZ9 245 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 FAM25EA8MYX2 175 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 NUDT21O43809 227 aaKnown RBP17.04■□□□□ 0.32
SCARF1-206ENST00000573852 GLULP15104 373 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 AVPR2P30518 371 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 SLC26A5P58743 744 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 VWA2Q5GFL6 755 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 GPR119Q8TDV5 335 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 PRRT1Q99946 306 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 DHCR7Q9UBM7 475 aaKnown RBP17.04■□□□□ 0.32
SCARF1-206ENST00000573852 CD207Q9UJ71 328 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 TRIOO75962 3097 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 C9orf170A2RU37 121 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 CPED1A4D0V7 1026 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 KCNAB3O43448 404 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 DCNP07585 359 aaKnown RBP17.04■□□□□ 0.32
SCARF1-206ENST00000573852 HLA-GP17693 338 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 ABCD3P28288 659 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 PPIAP62937 165 aaKnown RBP17.04■□□□□ 0.32
SCARF1-206ENST00000573852 MC2RQ01718 297 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 ELAVL1Q15717 326 aaKnown RBP17.04■□□□□ 0.32
SCARF1-206ENST00000573852 NUDCD2Q8WVJ2 157 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 FGGYQ96C11 551 aa17.04■□□□□ 0.32
SCARF1-206ENST00000573852 SULT2B1O00204 365 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 ZNF823P16415 610 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 EN2P19622 333 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-206ENST00000573852 CD96P40200 585 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 DCAF7P61962 342 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 UNC119Q13432 240 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 ZNF169Q14929 603 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-206ENST00000573852 TMEM17Q86X19 198 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 PRSS58Q8IYP2 241 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 CHST4Q8NCG5 386 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 MITD1Q8WV92 249 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 FAM46BQ96A09 425 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 NPAS1Q99742 590 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 WWTR1Q9GZV5 400 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 RAB22AQ9UL26 194 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 IGKV1D-43A0A0B4J1Z2 117 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 AHSA1O95433 338 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 IL2RAP01589 272 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 RAB6AP20340 208 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 CASRP41180 1078 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 IL13RA1P78552 427 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 PHF19Q5T6S3 580 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 ZNF704Q6ZNC4 412 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-206ENST00000573852 RTN4RL2Q86UN3 420 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 ADAD2Q8NCV1 583 aaKnown RBP17.03■□□□□ 0.32
SCARF1-206ENST00000573852 NARS2Q96I59 477 aaKnown RBP17.03■□□□□ 0.32
SCARF1-206ENST00000573852 FAM117AQ9C073 453 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 NKX2-4Q9H2Z4 354 aa17.03■□□□□ 0.32
SCARF1-206ENST00000573852 METTL21EPA6NDL7 271 aa17.02■□□□□ 0.32
SCARF1-206ENST00000573852 MS4A18H0YCH9 400 aa17.02■□□□□ 0.32
SCARF1-206ENST00000573852 SNTB1Q13884 538 aaKnown RBP17.02■□□□□ 0.32
SCARF1-206ENST00000573852 MS4A18Q3C1V0 323 aa17.02■□□□□ 0.32
SCARF1-206ENST00000573852 PAN3Q58A45 887 aaKnown RBP17.02■□□□□ 0.32
SCARF1-206ENST00000573852 ZNF813Q6ZN06 617 aa17.02■□□□□ 0.32
SCARF1-206ENST00000573852 GRINAQ7Z429 371 aa17.02■□□□□ 0.32
SCARF1-206ENST00000573852 OR52N4Q8NGI2 321 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms