RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 ANKRD60Q9BZ19 345 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 SEMA6AQ9H2E6 1030 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 RAD21L1Q9H4I0 556 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 TMEM38AQ9H6F2 299 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 GIN1Q9NXP7 522 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 SAMD4AQ9UPU9 718 aaKnown RBP5.72□□□□□ -1.49
CHD3-213ENST00000571249 AURKCQ9UQB9 309 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 LSM4Q9Y4Z0 139 aaKnown RBP5.72□□□□□ -1.49
CHD3-213ENST00000571249 NPTNQ9Y639 398 aa5.72□□□□□ -1.49
CHD3-213ENST00000571249 A0A1B0GW55 424 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 ANKRD61A6NGH8 418 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 TRIM64CA6NLI5 447 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 H0YAE9 185 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 SOCS2O14508 198 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 CPSF4O95639 269 aaKnown RBP5.71□□□□□ -1.5
CHD3-213ENST00000571249 IGHV2-70P01814 119 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 CCDC159P0C7I6 412 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 DUX4L2P0CJ85 424 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 DUX4L3P0CJ86 424 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 DUX4L5P0CJ88 424 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 DUX4L6P0CJ89 424 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 DUX4L7P0CJ90 424 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 THRBP10828 461 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 ACP2P11117 423 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 KDELR2P33947 212 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 TGFBR2P37173 567 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 MAP3K8P41279 467 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 SELENOPP49908 381 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 EFNB2P52799 333 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 PRKAG1P54619 331 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 SELENOVP59797 346 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 FGF12P61328 243 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 HBA1P69905 142 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 H3F3AP84243 136 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 GALK2Q01415 458 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 ROR2Q01974 943 aaKnown RBP5.71□□□□□ -1.5
CHD3-213ENST00000571249 CBFBQ13951 182 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 HEPACAMQ14CZ8 416 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 SLC36A3Q495N2 470 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 KLHL26Q53HC5 615 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 ATPAF1Q5TC12 328 aaPredicted RBP5.71□□□□□ -1.5
CHD3-213ENST00000571249 DUX4L9Q6RFH8 374 aaPredicted RBP5.71□□□□□ -1.5
CHD3-213ENST00000571249 CCDC80Q76M96 950 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 EIF3MQ7L2H7 374 aaKnown RBP5.71□□□□□ -1.5
CHD3-213ENST00000571249 SLC30A8Q8IWU4 369 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 MUC20Q8N307 709 aaPredicted RBP5.71□□□□□ -1.5
CHD3-213ENST00000571249 CBR4Q8N4T8 237 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 TRIML2Q8N7C3 387 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 FAM86B1Q8N7N1 296 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 OR9K2Q8NGE7 335 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 ZFP28Q8NHY6 868 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 RAB40AQ8WXH6 277 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 OR5P2Q8WZ92 322 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 NRBF2Q96F24 287 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 PYURFQ96I23 114 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 CIB1Q99828 191 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 NAA11Q9BSU3 229 aaPredicted RBP5.71□□□□□ -1.5
CHD3-213ENST00000571249 OR11A1Q9GZK7 315 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 DPAGT1Q9H3H5 408 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 GLIPR2Q9H4G4 154 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 SMURF2Q9HAU4 748 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 DCAF16Q9NXF7 216 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 USE1Q9NZ43 259 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 SH3BP4Q9P0V3 963 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 DUX4Q9UBX2 424 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 RPS6KA6Q9UK32 745 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 OAZ3Q9UMX2 235 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 PCDHGB4Q9UN71 923 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 HDGFL3Q9Y3E1 203 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 SNX5Q9Y5X3 404 aa5.71□□□□□ -1.5
CHD3-213ENST00000571249 SPIN1Q9Y657 262 aaPredicted RBP5.71□□□□□ -1.5
CHD3-213ENST00000571249 A0A0U1RQK1 487 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 KIR2DS1A0A191URI9 304 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 DPPA5A6NC42 116 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 SPRY3O43610 288 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 CYP7B1O75881 506 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 TNFAIP8O95379 198 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 KRT75O95678 551 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 C6orf47O95873 294 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 SERPINA1P01009 418 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 HLA-HP01893 362 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 TK1P04183 234 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 VSIG10L2P0DP72 767 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 ZNF14P17017 642 aaPredicted RBP5.7□□□□□ -1.5
CHD3-213ENST00000571249 CCNA2P20248 432 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 UQCRC2P22695 453 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 MYF6P23409 242 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 ALDH3A2P51648 485 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 CRYBA2P53672 197 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 SH3BGRP55822 239 aaPredicted RBP5.7□□□□□ -1.5
CHD3-213ENST00000571249 KLF3P57682 345 aaPredicted RBP5.7□□□□□ -1.5
CHD3-213ENST00000571249 SLC35A1P78382 337 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 ADARB1P78563 741 aaKnown RBP5.7□□□□□ -1.5
CHD3-213ENST00000571249 GLO1Q04760 184 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 EPS8Q12929 822 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 DUSP5Q16690 384 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 TMEM155Q4W5P6 130 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 CYBRD1Q53TN4 286 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.7□□□□□ -1.5
CHD3-213ENST00000571249 PRAMEF8Q5VWM4 474 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms