RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SRSF2Q01130 221 aaKnown RBP10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 PSG7Q13046 419 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 SCGB2A2Q13296 93 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 ACSM5Q6NUN0 579 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 C1orf94Q6P1W5 598 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 LEG1Q6P5S2 330 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 PGM2L1Q6PCE3 622 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 PEG10Q86TG7 708 aaKnown RBP10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 DEFB107AQ8IZN7 70 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 OR1F12Q8NHA8 337 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 SLC7A6Q92536 515 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 GPA33Q99795 319 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 C19orf24Q9BVV8 132 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 IFT27Q9BW83 186 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 OR52D1Q9H346 318 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 ARL8BQ9NVJ2 186 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 CD300AQ9UGN4 299 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 ATPIF1Q9UII2 106 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 PURGQ9UJV8 347 aaKnown RBP10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 J3QW42 95 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 RER1O15258 196 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 UBOX5O94941 541 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 PNPP00491 289 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 RENP00797 406 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 IGHV2-5P01817 119 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 CD55P08174 381 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 KITLGP21583 273 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 NOS3P29474 1203 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 CDKN2AP42771 156 aaKnown RBP10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 RGS6P49758 472 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 MNAT1P51948 309 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 KCNMB1Q16558 191 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 RFX4Q33E94 735 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 SPATS1Q496A3 300 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 FAHD2BQ6P2I3 314 aaPredicted RBP10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 TEX29Q8N6K0 151 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 GJC3Q8NFK1 279 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 CMBLQ96DG6 245 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 FAHD2AQ96GK7 314 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 TSSK2Q96PF2 358 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 DCLRE1CQ96SD1 692 aaKnown RBP10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 HDHD2Q9H0R4 259 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 POFUT1Q9H488 388 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 METTL17Q9H7H0 456 aaPredicted RBP10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 IL1RAPQ9NPH3 570 aa10.48□□□□□ -0.73
CTDNEP1-205ENST00000570828 IGLV1-36A0A0B4J1U3 117 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 A0A0G2JMP0 313 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 A0A0X1KG70 313 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 ARPC3O15145 178 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 TNFRSF1AP19438 455 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 MAP2K3P46734 347 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 CDK5R2Q13319 367 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 MEP1BQ16820 701 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 CCDC92Q53HC0 331 aaPredicted RBP10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 ZNF620Q6ZNG0 422 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 ZNF771Q7L3S4 317 aaPredicted RBP10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 PIGWQ7Z7B1 504 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 ZDHHC21Q8IVQ6 265 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 OR2Z1Q8NG97 314 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 OR4M2Q8NGB6 313 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 OR5L1Q8NGL2 311 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 SAMD8Q96LT4 415 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 NMNAT3Q96T66 252 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 COQ7Q99807 217 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 RPRD1BQ9NQG5 326 aaKnown RBP10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 UBAP1Q9NZ09 502 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 KLHL21Q9UJP4 597 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 STARD10Q9Y365 291 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 LHFPL6Q9Y693 200 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 ANK2Q01484 3957 aa10.47□□□□□ -0.73
CTDNEP1-205ENST00000570828 DCTN6O00399 190 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 SURF4O15260 269 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 PLPP2O43688 288 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 DEAF1O75398 565 aaPredicted RBP10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 GPANK1O95872 356 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 DBHP09172 617 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 RAC2P15153 192 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 HIST1H1CP16403 213 aaKnown RBP10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 COX10Q12887 443 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 TSPAN31Q12999 210 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 OR6V1Q8N148 313 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 SDR9C7Q8NEX9 313 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 SLC26A10Q8NG04 563 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 OR52L1Q8NGH7 329 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 OR4K13Q8NH42 304 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 GNPDA2Q8TDQ7 276 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 APOBEC3DQ96AK3 386 aaPredicted RBP10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 HAVCR1Q96D42 359 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 SRA1Q9HD15 236 aaKnown RBP10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 TMEM106BQ9NUM4 274 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 PTTG3PQ9NZH4 202 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 B9D1Q9UPM9 204 aa10.46□□□□□ -0.73
CTDNEP1-205ENST00000570828 J3QLI3 93 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 IDH3BO43837 385 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 KRT36O76013 467 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 HLA-DQA2P01906 255 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 ATP6V1B2P21281 511 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 GATA3P23771 443 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 GSSP48637 474 aa10.45□□□□□ -0.74
CTDNEP1-205ENST00000570828 ERFP50548 548 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms