RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 OR6K6Q8NGW6 343 aa13.02□□□□□ -0.33
RAB40B-203ENST00000570676 ZNRF4Q8WWF5 429 aa13.02□□□□□ -0.33
RAB40B-203ENST00000570676 RACGAP1Q9H0H5 632 aa13.02□□□□□ -0.33
RAB40B-203ENST00000570676 COA3Q9Y2R0 106 aaPredicted RBP13.02□□□□□ -0.33
RAB40B-203ENST00000570676 CCDC182A6NF36 153 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 SLC22A31A6NKX4 558 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 SNTNA6NMZ2 147 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 A8MV72 311 aaPredicted RBP13.01□□□□□ -0.33
RAB40B-203ENST00000570676 DHHO43323 396 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 GLCEO94923 617 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 CD79AP11912 226 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 ZNF35P13682 527 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 ZNF16P17020 682 aaPredicted RBP13.01□□□□□ -0.33
RAB40B-203ENST00000570676 NPR2P20594 1047 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 HTR1FP30939 366 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 PDLIM4P50479 330 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 ZNF84P51523 738 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 PIGFQ07326 219 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 SLC35D3Q5M8T2 416 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 C10orf128Q5T292 105 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 LCN1P1Q5VSP4 162 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 ZNF786Q8N393 782 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 IL17RDQ8NFM7 739 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 FGFBP3Q8TAT2 258 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 FOXN4Q96NZ1 517 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 TEAD3Q99594 435 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 DOK1Q99704 481 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 VRK1Q99986 396 aaPredicted RBP13.01□□□□□ -0.33
RAB40B-203ENST00000570676 AMBNQ9NP70 447 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.01□□□□□ -0.33
RAB40B-203ENST00000570676 MALRD1Q5VYJ5 2156 aa13.01□□□□□ -0.33
RAB40B-203ENST00000570676 A0A1W2PPL8 197 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 NDUFS8O00217 210 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 FAM20BO75063 409 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 UBL3O95164 117 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 RAB36O95755 333 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 GPANK1O95872 356 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 HLA-DQA2P01906 255 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 IGHV4-31P0DP07 118 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 USF1P22415 310 aaPredicted RBP13□□□□□ -0.33
RAB40B-203ENST00000570676 NR4A1P22736 598 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 BLVRAP53004 296 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 GLO1Q04760 184 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 ZNF91Q05481 1191 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 LINC01590Q5TEZ4 76 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 ZNF584Q8IVC4 421 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 GLB1L2Q8IW92 636 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 SKA3Q8IX90 412 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 BPIFB6Q8NFQ5 453 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 ZMYND19Q96E35 227 aaPredicted RBP13□□□□□ -0.33
RAB40B-203ENST00000570676 MDFIQ99750 246 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 PIMREGQ9BSJ6 248 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 MYOZ1Q9NP98 299 aaPredicted RBP13□□□□□ -0.33
RAB40B-203ENST00000570676 TMEM38BQ9NVV0 291 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 WARS2Q9UGM6 360 aaKnown RBP13□□□□□ -0.33
RAB40B-203ENST00000570676 RPL36Q9Y3U8 105 aaKnown RBP13□□□□□ -0.33
RAB40B-203ENST00000570676 UGT2A1Q9Y4X1 527 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 RTTNQ86VV8 2226 aa13□□□□□ -0.33
RAB40B-203ENST00000570676 DNHD1Q96M86 4753 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 SLC1A7O00341 560 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 XPNPEP2O43895 674 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 PATE4P0C8F1 98 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 DBTP11182 482 aaKnown RBP12.99□□□□□ -0.33
RAB40B-203ENST00000570676 LAP3P28838 519 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 GSTT1P30711 240 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 CDAP32320 146 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 GUCA1AP43080 201 aaPredicted RBP12.99□□□□□ -0.33
RAB40B-203ENST00000570676 NR4A2P43354 598 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 MTNR1AP48039 350 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 CXCR4P61073 352 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 RAB1AP62820 205 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 CSNK2BP67870 215 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 TMED1Q13445 227 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 RAB39AQ14964 217 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 LYPD4Q6UWN0 246 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.99□□□□□ -0.33
RAB40B-203ENST00000570676 SLC22A24Q8N4F4 322 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 ZNF511Q8NB15 262 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 MRPL24Q96A35 216 aaKnown RBP12.99□□□□□ -0.33
RAB40B-203ENST00000570676 RNFT2Q96EX2 444 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 MRPL37Q9BZE1 423 aaKnown RBP12.99□□□□□ -0.33
RAB40B-203ENST00000570676 PLCXD1Q9NUJ7 323 aa12.99□□□□□ -0.33
RAB40B-203ENST00000570676 FBXO9Q9UK97 447 aaPredicted RBP12.99□□□□□ -0.33
RAB40B-203ENST00000570676 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.98□□□□□ -0.33
RAB40B-203ENST00000570676 IGHV4-61A0A0C4DH41 118 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 LOC390937A0A1W2PQ73 354 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 TVP23AA6NH52 213 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 MPZL1O95297 269 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 GAAP10253 952 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 ATP6V1E1P36543 226 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 HSF2Q03933 536 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 GGTLC2Q14390 218 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 SGCAQ16586 387 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 RBM48Q5RL73 367 aaKnown RBP12.98□□□□□ -0.33
RAB40B-203ENST00000570676 OTPQ5XKR4 325 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 UGT2A3Q6UWM9 527 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 FOXL2NBQ6ZUU3 175 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 ZCCHC24Q8N2G6 241 aaKnown RBP12.98□□□□□ -0.33
RAB40B-203ENST00000570676 SLC26A10Q8NG04 563 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 BPESC1Q9GZL8 116 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms